May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

RECF - RNPA
UniProt:
Length: 476
Sequences: 1119
Seq/Len: 2.39
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
271_R 50_T 1.10 0.01
253_K 60_H 1.05 0.01
104_K 66_K 1.01 0.01
118_T 50_T 1.01 0.01
273_Q 108_L 1.00 0.01
271_R 22_F 1.00 0.01
15_E 86_V 0.98 0.01
96_R 111_R 0.98 0.01
11_F 68_L 0.96 0.01
74_L 107_K 0.95 0.01
49_G 64_R 0.94 0.01
255_D 90_K 0.94 0.01
320_L 49_L 0.92 0.01
33_G 107_K 0.91 0.01
330_S 17_Q 0.90 0.01
56_Q 54_K 0.90 0.01
204_A 99_R 0.88 0.01
166_R 66_K 0.88 0.01
43_I 17_Q 0.88 0.01
101_D 33_I 0.86 0.01
274_L 90_K 0.86 0.01
233_V 85_F 0.85 0.01
248_A 25_P 0.85 0.01
355_I 47_I 0.84 0.01
33_G 56_V 0.84 0.01
341_S 65_I 0.83 0.01
328_F 91_K 0.81 0.01
177_W 13_L 0.81 0.01
280_A 107_K 0.81 0.01
241_D 77_Q 0.80 0.01
264_P 52_A 0.80 0.01
210_F 50_T 0.80 0.01
193_A 81_P 0.79 0.01
52_F 36_L 0.79 0.01
37_T 51_V 0.79 0.01
236_R 105_L 0.78 0.01
52_F 87_V 0.78 0.01
148_F 77_Q 0.78 0.01
185_A 60_H 0.78 0.01
258_I 65_I 0.78 0.01
6_L 65_I 0.78 0.01
156_R 87_V 0.78 0.01
71_H 34_T 0.78 0.01
351_E 8_R 0.78 0.01
269_L 57_R 0.77 0.01
21_L 66_K 0.77 0.01
352_K 37_G 0.76 0.00
305_A 13_L 0.76 0.00
147_F 50_T 0.76 0.00
116_L 50_T 0.75 0.00
39_V 99_R 0.75 0.00
39_V 66_K 0.75 0.00
17_A 103_E 0.74 0.00
237_N 43_G 0.74 0.00
57_I 52_A 0.74 0.00
275_K 108_L 0.74 0.00
158_L 65_I 0.74 0.00
253_K 34_T 0.74 0.00
179_K 98_N 0.73 0.00
219_S 43_G 0.73 0.00
247_T 66_K 0.73 0.00
47_G 47_I 0.73 0.00
228_T 78_H 0.73 0.00
255_D 18_F 0.73 0.00
4_T 95_D 0.72 0.00
255_D 84_D 0.72 0.00
45_T 93_V 0.72 0.00
97_I 86_V 0.72 0.00
161_R 65_I 0.72 0.00
281_L 12_L 0.72 0.00
126_N 57_R 0.72 0.00
273_Q 90_K 0.71 0.00
136_L 35_I 0.71 0.00
84_G 63_N 0.71 0.00
215_S 111_R 0.71 0.00
205_D 103_E 0.71 0.00
122_F 36_L 0.71 0.00
283_L 61_E 0.71 0.00
348_F 72_S 0.71 0.00
163_A 105_L 0.71 0.00
127_G 11_R 0.71 0.00
70_L 8_R 0.70 0.00
288_F 66_K 0.70 0.00
230_Y 97_D 0.70 0.00
162_N 84_D 0.70 0.00
137_D 108_L 0.70 0.00
188_I 46_R 0.70 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.2002 seconds.