May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

RBFA - YHBS
UniProt:
Length: 300
Sequences: 646
Seq/Len: 2.23
I_Prob: 0.04
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
38_V 150_A 1.20 0.04
70_K 9_I 0.99 0.02
11_V 90_R 0.98 0.02
53_Y 93_V 0.89 0.01
37_T 84_R 0.89 0.01
20_A 117_Y 0.88 0.01
69_I 93_V 0.87 0.01
89_L 97_L 0.83 0.01
55_T 145_R 0.82 0.01
52_V 48_D 0.80 0.01
85_K 18_L 0.79 0.01
79_I 16_A 0.77 0.01
108_R 47_T 0.77 0.01
106_G 27_E 0.75 0.01
58_N 97_L 0.74 0.01
12_A 13_G 0.74 0.01
36_T 59_F 0.74 0.01
36_T 131_R 0.74 0.01
111_N 14_I 0.73 0.01
85_K 17_L 0.73 0.01
79_I 24_S 0.73 0.01
10_R 150_A 0.72 0.01
27_I 48_D 0.71 0.01
86_A 20_R 0.71 0.01
70_K 53_V 0.71 0.01
80_R 110_T 0.70 0.01
74_E 63_D 0.69 0.01
23_L 143_V 0.69 0.01
52_V 146_L 0.69 0.01
90_R 122_F 0.68 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.3487 seconds.