May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

RAIA - RATB
UniProt:
Length: 209
Sequences: 390
Seq/Len: 2.01
I_Prob: 0.13
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
37_P 55_I 1.35 0.13
31_Q 30_V 1.16 0.07
42_S 66_V 1.08 0.06
46_Q 44_T 1.05 0.05
51_D 37_S 1.04 0.05
78_I 37_S 1.04 0.05
73_A 53_V 1.02 0.05
27_L 67_H 1.01 0.04
3_M 9_V 1.00 0.04
52_A 8_E 0.96 0.04
62_V 87_R 0.96 0.04
52_A 10_A 0.95 0.04
6_T 61_K 0.95 0.04
40_I 19_L 0.95 0.04
31_Q 53_V 0.95 0.04
37_P 29_T 0.95 0.04
62_V 80_A 0.93 0.03
48_F 20_Q 0.93 0.03
52_A 90_A 0.92 0.03
16_I 88_Q 0.92 0.03
70_M 53_V 0.91 0.03
37_P 58_R 0.90 0.03
90_H 8_E 0.89 0.03
53_T 69_G 0.89 0.03
68_E 7_V 0.89 0.03
91_K 8_E 0.89 0.03
16_I 9_V 0.89 0.03
35_I 87_R 0.87 0.03
88_L 23_T 0.87 0.03
88_L 7_V 0.87 0.03
78_I 46_I 0.87 0.03
74_I 8_E 0.86 0.03
10_M 19_L 0.86 0.03
15_A 92_K 0.86 0.03
14_P 26_E 0.85 0.03
97_A 91_E 0.84 0.03
35_I 58_R 0.84 0.02
67_H 56_Y 0.83 0.02
91_K 80_A 0.83 0.02
87_K 84_E 0.83 0.02
29_K 88_Q 0.82 0.02
49_V 85_L 0.82 0.02
65_G 90_A 0.81 0.02
20_V 7_V 0.81 0.02
70_M 10_A 0.81 0.02
22_D 22_V 0.80 0.02
35_I 56_Y 0.80 0.02
17_R 10_A 0.80 0.02
51_D 43_R 0.80 0.02
61_L 55_I 0.78 0.02
34_L 16_K 0.78 0.02
38_H 46_I 0.78 0.02
84_Q 74_I 0.78 0.02
88_L 28_A 0.78 0.02
84_Q 12_A 0.77 0.02
12_I 60_A 0.77 0.02
17_R 14_P 0.77 0.02
11_E 79_I 0.77 0.02
30_W 57_S 0.76 0.02
47_G 16_K 0.76 0.02
77_L 67_H 0.76 0.02
24_L 32_E 0.75 0.02
91_K 84_E 0.75 0.02
18_Q 27_G 0.75 0.02
94_A 92_K 0.74 0.02
64_S 87_R 0.74 0.02
74_I 90_A 0.73 0.02
15_A 67_H 0.73 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0861 seconds.