May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

PYRE - PYRI
UniProt:
Length: 366
Sequences: 377
Seq/Len: 1.04
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
147_L 116_S 1.40 0.01
5_Q 23_A 1.26 0.01
149_G 116_S 1.22 0.00
66_L 116_S 1.20 0.00
65_D 98_S 1.17 0.00
75_I 125_F 1.15 0.00
35_F 75_A 1.14 0.00
135_E 75_A 1.13 0.00
186_D 131_A 1.10 0.00
98_N 74_L 1.10 0.00
70_P 83_V 1.09 0.00
187_L 106_V 1.08 0.00
49_L 143_K 1.08 0.00
66_L 107_L 1.06 0.00
81_T 131_A 1.06 0.00
70_P 35_L 1.04 0.00
71_A 125_F 1.03 0.00
35_F 78_A 1.03 0.00
55_E 12_I 1.03 0.00
206_A 83_V 1.02 0.00
14_S 116_S 0.99 0.00
118_G 137_K 0.98 0.00
36_N 115_I 0.98 0.00
53_Y 99_L 0.97 0.00
68_F 45_G 0.97 0.00
117_Q 142_E 0.97 0.00
60_S 12_I 0.96 0.00
14_S 92_V 0.96 0.00
172_R 102_R 0.95 0.00
124_D 81_A 0.95 0.00
199_E 105_N 0.95 0.00
124_D 30_L 0.94 0.00
21_G 57_D 0.93 0.00
136_S 6_K 0.93 0.00
95_Y 116_S 0.92 0.00
123_V 133_D 0.92 0.00
10_E 73_Q 0.90 0.00
8_F 106_V 0.90 0.00
177_K 92_V 0.90 0.00
169_E 104_D 0.90 0.00
158_E 142_E 0.89 0.00
127_I 25_I 0.89 0.00
71_A 72_D 0.89 0.00
98_N 145_F 0.88 0.00
10_E 126_A 0.88 0.00
54_A 124_S 0.88 0.00
138_E 34_K 0.88 0.00
42_T 7_L 0.87 0.00
177_K 55_R 0.87 0.00
59_D 39_D 0.87 0.00
209_E 131_A 0.86 0.00
140_I 59_I 0.86 0.00
146_T 80_Q 0.86 0.00
128_T 82_T 0.86 0.00
19_K 86_I 0.85 0.00
160_G 42_I 0.85 0.00
52_F 116_S 0.85 0.00
140_I 142_E 0.85 0.00
114_S 59_I 0.85 0.00
169_E 88_N 0.85 0.00
29_R 9_V 0.85 0.00
93_L 126_A 0.85 0.00
17_V 99_L 0.85 0.00
151_L 107_L 0.84 0.00
26_K 98_S 0.84 0.00
121_M 11_A 0.84 0.00
173_D 86_I 0.84 0.00
141_Q 95_S 0.84 0.00
103_K 9_V 0.84 0.00
78_A 84_N 0.83 0.00
32_P 108_V 0.83 0.00
29_R 106_V 0.83 0.00
71_A 95_S 0.83 0.00
210_E 132_N 0.83 0.00
199_E 132_N 0.83 0.00
118_G 119_E 0.83 0.00
3_P 87_D 0.83 0.00
50_G 81_A 0.82 0.00
24_T 52_E 0.82 0.00
18_L 136_L 0.82 0.00
139_I 9_V 0.82 0.00
117_Q 55_R 0.82 0.00
142_A 146_S 0.82 0.00
41_N 74_L 0.82 0.00
152_I 58_L 0.82 0.00
94_P 49_P 0.82 0.00
161_R 4_D 0.81 0.00
70_P 91_V 0.81 0.00
55_E 42_I 0.81 0.00
59_D 106_V 0.81 0.00
67_L 93_G 0.80 0.00
16_Q 73_Q 0.80 0.00
137_M 28_K 0.80 0.00
184_L 35_L 0.80 0.00
140_I 133_D 0.80 0.00
114_S 150_V 0.80 0.00
153_S 76_L 0.80 0.00
164_I 2_T 0.79 0.00
174_Y 29_L 0.79 0.00
122_L 78_A 0.79 0.00
168_Q 79_P 0.79 0.00
150_V 120_P 0.79 0.00
15_K 43_T 0.79 0.00
142_A 90_E 0.79 0.00
16_Q 99_L 0.79 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.2749 seconds.