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OPENSEQ.org

PPNK - TRMD
UniProt:
Length: 547
Sequences: 1337
Seq/Len: 2.52
I_Prob: 0.29
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
13_H 114_R 1.35 0.29
97_N 58_P 1.34 0.28
220_P 71_I 1.11 0.15
218_A 162_H 1.00 0.10
90_V 99_V 0.87 0.06
166_I 122_V 0.85 0.06
182_S 206_R 0.83 0.05
220_P 169_D 0.81 0.05
223_I 37_S 0.80 0.05
239_D 212_S 0.80 0.05
121_Y 85_I 0.79 0.04
103_D 122_V 0.77 0.04
97_N 162_H 0.76 0.04
101_L 161_G 0.75 0.04
88_I 156_I 0.75 0.04
263_C 41_F 0.75 0.04
102_T 2_W 0.74 0.04
92_G 49_V 0.73 0.04
161_E 58_P 0.73 0.04
39_V 152_V 0.73 0.04
76_M 169_D 0.73 0.04
91_I 146_M 0.72 0.03
263_C 7_S 0.72 0.03
77_L 25_A 0.71 0.03
182_S 153_S 0.71 0.03
130_E 103_A 0.71 0.03
189_A 88_S 0.71 0.03
77_L 130_E 0.71 0.03
183_T 42_T 0.70 0.03
157_A 156_I 0.70 0.03
209_V 58_P 0.70 0.03
231_L 200_N 0.70 0.03
70_V 120_E 0.70 0.03
258_V 11_E 0.70 0.03
87_D 203_E 0.70 0.03
79_A 219_R 0.69 0.03
181_I 87_L 0.69 0.03
68_V 222_E 0.69 0.03
191_S 87_L 0.69 0.03
189_A 130_E 0.69 0.03
212_F 102_L 0.69 0.03
125_K 85_I 0.68 0.03
68_V 153_S 0.68 0.03
159_M 7_S 0.68 0.03
69_V 20_G 0.67 0.03
184_P 54_Y 0.67 0.03
189_A 22_T 0.67 0.03
93_I 191_E 0.66 0.03
98_L 139_S 0.66 0.03
235_H 146_M 0.66 0.03
101_L 215_R 0.66 0.03
278_F 8_L 0.66 0.03
129_L 127_I 0.65 0.03
75_N 4_G 0.65 0.03
127_F 38_P 0.65 0.02
68_V 103_A 0.65 0.02
206_I 225_E 0.65 0.02
16_H 114_R 0.65 0.02
189_A 24_R 0.64 0.02
269_L 57_G 0.64 0.02
168_E 108_L 0.64 0.02
9_G 161_G 0.64 0.02
222_V 58_P 0.64 0.02
208_L 186_V 0.64 0.02
92_G 160_L 0.64 0.02
208_L 71_I 0.63 0.02
120_H 31_L 0.63 0.02
191_S 58_P 0.63 0.02
113_L 48_T 0.63 0.02
179_L 5_I 0.63 0.02
260_I 209_L 0.62 0.02
153_P 8_L 0.62 0.02
220_P 52_R 0.62 0.02
281_L 12_M 0.62 0.02
126_R 118_I 0.62 0.02
234_S 136_Y 0.62 0.02
272_P 114_R 0.62 0.02
47_L 111_V 0.62 0.02
98_L 88_S 0.61 0.02
115_D 37_S 0.61 0.02
77_L 169_D 0.61 0.02
10_I 101_E 0.61 0.02
128_L 8_L 0.61 0.02
190_Y 41_F 0.61 0.02
176_S 139_S 0.61 0.02
92_G 140_G 0.60 0.02
115_D 13_F 0.60 0.02
174_Q 20_G 0.60 0.02
67_A 99_V 0.60 0.02
123_S 151_S 0.60 0.02
258_V 54_Y 0.60 0.02
288_S 83_K 0.60 0.02
182_S 226_N 0.60 0.02
148_E 202_A 0.60 0.02
129_L 175_L 0.59 0.02
13_H 3_I 0.59 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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