May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

DNAA - YIDD
UniProt:
Length: 552
Sequences: 1176
Seq/Len: 2.20
I_Prob: 0.50
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
461_L 52_K 1.49 0.50
158_A 41_G 1.09 0.19
265_I 27_L 1.04 0.16
75_R 61_V 0.98 0.13
223_K 67_L 0.92 0.10
461_L 13_I 0.91 0.10
59_I 36_T 0.91 0.10
444_I 65_H 0.88 0.09
375_T 51_I 0.88 0.09
25_W 75_V 0.86 0.08
171_Y 65_H 0.86 0.08
185_V 10_R 0.86 0.08
460_N 23_I 0.83 0.07
324_F 30_H 0.82 0.07
396_S 28_G 0.82 0.07
315_I 41_G 0.82 0.07
50_W 32_R 0.81 0.07
21_E 20_Q 0.80 0.06
385_E 56_L 0.80 0.06
426_G 53_G 0.79 0.06
388_K 17_R 0.79 0.06
423_P 32_R 0.79 0.06
198_V 55_W 0.79 0.06
205_R 20_Q 0.78 0.06
436_T 44_A 0.78 0.06
267_T 33_F 0.77 0.06
426_G 49_G 0.77 0.06
46_F 32_R 0.77 0.05
396_S 76_P 0.76 0.05
446_Q 43_E 0.75 0.05
73_Q 12_L 0.73 0.04
7_Q 29_P 0.73 0.04
35_D 16_I 0.73 0.04
68_G 76_P 0.73 0.04
46_F 68_H 0.72 0.04
389_I 27_L 0.72 0.04
64_T 67_L 0.72 0.04
411_M 44_A 0.72 0.04
461_L 41_G 0.72 0.04
441_C 72_D 0.71 0.04
436_T 49_G 0.71 0.04
46_F 25_P 0.71 0.04
59_I 67_L 0.71 0.04
222_F 32_R 0.70 0.04
302_R 43_E 0.69 0.04
458_F 16_I 0.69 0.04
108_R 9_S 0.69 0.04
57_N 8_G 0.69 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.456 seconds.