May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

DAPB - DYR
UniProt:
Length: 432
Sequences: 1223
Seq/Len: 2.88
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
145_K 47_W 0.95 0.00
210_T 2_I 0.86 0.00
71_D 123_T 0.84 0.00
129_F 92_M 0.83 0.00
9_A 81_A 0.81 0.00
241_M 63_S 0.76 0.00
132_G 125_F 0.73 0.00
235_H 125_F 0.72 0.00
97_K 156_L 0.67 0.00
148_G 26_A 0.67 0.00
178_I 115_I 0.66 0.00
76_F 25_P 0.65 0.00
141_E 63_S 0.65 0.00
21_L 24_L 0.65 0.00
135_V 111_Y 0.65 0.00
221_T 50_I 0.65 0.00
233_I 29_A 0.64 0.00
117_A 63_S 0.63 0.00
39_R 104_L 0.63 0.00
140_L 29_A 0.61 0.00
37_L 79_D 0.60 0.00
139_L 5_I 0.60 0.00
131_V 12_R 0.59 0.00
224_F 153_F 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.5465 seconds.