May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

CLPS - IF1
UniProt:
Length: 178
Sequences: 427
Seq/Len: 2.57
I_Prob: 0.22
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
100_L 49_T 1.32 0.22
44_I 10_Q 1.22 0.17
82_E 40_M 1.19 0.16
101_C 4_E 1.13 0.13
29_K 69_F 1.11 0.12
78_A 8_E 1.11 0.12
88_V 18_P 1.09 0.12
105_K 2_A 1.06 0.10
24_P 69_F 1.01 0.09
79_E 43_N 1.00 0.08
99_L 40_M 0.95 0.07
70_K 44_Y 0.93 0.07
64_A 69_F 0.92 0.06
103_L 52_K 0.90 0.06
31_I 14_L 0.88 0.06
101_C 61_D 0.88 0.05
39_P 43_N 0.87 0.05
102_T 12_T 0.87 0.05
79_E 23_R 0.87 0.05
79_E 12_T 0.87 0.05
36_D 43_N 0.87 0.05
60_Q 32_V 0.85 0.05
101_C 5_D 0.84 0.05
32_L 39_K 0.84 0.05
79_E 69_F 0.84 0.05
100_L 16_T 0.83 0.05
100_L 58_T 0.83 0.04
89_N 20_T 0.82 0.04
102_T 21_M 0.82 0.04
106_A 9_M 0.82 0.04
53_Y 72_R 0.80 0.04
67_Y 69_F 0.80 0.04
54_D 21_M 0.79 0.04
22_L 23_R 0.79 0.04
22_L 63_S 0.78 0.04
61_L 68_V 0.78 0.04
69_G 13_V 0.78 0.04
82_E 69_F 0.77 0.04
55_V 57_L 0.77 0.04
82_E 42_K 0.75 0.03
99_L 69_F 0.75 0.03
42_F 19_N 0.74 0.03
78_A 39_K 0.74 0.03
65_V 32_V 0.74 0.03
87_M 23_R 0.74 0.03
33_V 32_V 0.74 0.03
89_N 33_T 0.74 0.03
22_L 13_V 0.74 0.03
97_H 32_V 0.73 0.03
60_Q 10_Q 0.73 0.03
32_L 14_L 0.73 0.03
77_T 13_V 0.73 0.03
101_C 42_K 0.72 0.03
50_F 58_T 0.72 0.03
73_C 58_T 0.71 0.03
16_E 47_I 0.71 0.03
99_L 55_V 0.70 0.03
37_Y 4_E 0.70 0.03
95_N 55_V 0.70 0.03
97_H 9_M 0.69 0.03
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0904 seconds.