May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

CDSA - RRF
UniProt:
Length: 470
Sequences: 1700
Seq/Len: 3.71
I_Prob: 0.04
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
184_V 112_D 1.09 0.04
189_T 141_A 1.05 0.04
189_T 69_V 1.03 0.04
251_G 15_K 0.98 0.03
254_I 67_I 0.96 0.03
270_A 12_R 0.95 0.03
264_I 29_T 0.95 0.03
261_L 18_E 0.92 0.03
231_S 98_I 0.90 0.03
116_S 128_V 0.86 0.02
187_G 12_R 0.86 0.02
189_T 154_R 0.85 0.02
21_F 183_M 0.83 0.02
204_S 185_F 0.82 0.02
170_M 65_L 0.82 0.02
130_P 182_L 0.82 0.02
250_S 72_R 0.80 0.02
233_L 90_N 0.80 0.02
202_V 125_R 0.79 0.02
31_V 105_L 0.78 0.02
127_T 60_E 0.76 0.02
92_S 149_S 0.76 0.02
189_T 9_A 0.76 0.02
139_R 143_L 0.75 0.01
241_F 40_I 0.74 0.01
20_L 74_M 0.74 0.01
201_A 174_A 0.74 0.01
8_S 51_L 0.74 0.01
180_L 24_I 0.73 0.01
253_L 160_V 0.73 0.01
264_I 89_L 0.73 0.01
181_A 120_E 0.73 0.01
92_S 100_V 0.73 0.01
166_S 27_I 0.73 0.01
127_T 51_L 0.72 0.01
246_G 139_V 0.72 0.01
253_L 142_L 0.72 0.01
100_L 17_V 0.71 0.01
65_L 9_A 0.71 0.01
160_L 75_S 0.71 0.01
76_Y 171_I 0.71 0.01
237_T 67_I 0.70 0.01
222_I 16_C 0.70 0.01
263_R 172_E 0.70 0.01
166_S 119_G 0.70 0.01
158_M 29_T 0.70 0.01
210_W 24_I 0.69 0.01
257_H 172_E 0.69 0.01
127_T 102_L 0.69 0.01
138_L 69_V 0.69 0.01
160_L 146_K 0.69 0.01
154_L 111_K 0.69 0.01
28_F 133_R 0.69 0.01
197_L 78_V 0.69 0.01
275_A 78_V 0.68 0.01
9_A 181_E 0.68 0.01
162_W 29_T 0.68 0.01
187_G 143_L 0.68 0.01
190_W 16_C 0.68 0.01
157_V 10_E 0.68 0.01
32_T 184_Q 0.67 0.01
197_L 16_C 0.67 0.01
237_T 71_D 0.67 0.01
274_F 100_V 0.67 0.01
66_L 6_R 0.67 0.01
245_A 6_R 0.67 0.01
230_A 67_I 0.67 0.01
32_T 127_A 0.67 0.01
180_L 38_D 0.67 0.01
13_I 154_R 0.66 0.01
198_A 155_R 0.66 0.01
158_M 183_M 0.66 0.01
30_I 41_V 0.66 0.01
229_L 159_D 0.65 0.01
178_H 90_N 0.65 0.01
127_T 27_I 0.65 0.01
193_F 180_A 0.65 0.01
134_G 182_L 0.64 0.01
270_A 60_E 0.64 0.01
156_Y 113_L 0.64 0.01
275_A 72_R 0.64 0.01
250_S 134_D 0.64 0.01
6_L 29_T 0.64 0.01
127_T 93_S 0.64 0.01
260_I 15_K 0.63 0.01
203_I 167_A 0.63 0.01
154_L 67_I 0.63 0.01
90_W 92_N 0.62 0.01
229_L 73_S 0.62 0.01
261_L 130_N 0.62 0.01
107_P 67_I 0.62 0.01
11_V 148_I 0.62 0.01
63_G 19_A 0.62 0.01
161_V 53_Q 0.62 0.01
5_R 134_D 0.62 0.01
227_A 51_L 0.62 0.01
171_F 121_A 0.62 0.01
17_I 169_K 0.61 0.01
181_A 64_T 0.61 0.01
128_I 34_P 0.61 0.01
253_L 175_L 0.61 0.01
198_A 18_E 0.61 0.01
28_F 104_P 0.60 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.2262 seconds.