May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ATP6 - RSMG
UniProt:
Length: 478
Sequences: 1090
Seq/Len: 2.35
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
204_P 94_L 1.03 0.00
254_F 173_I 1.03 0.00
268_S 13_G 1.00 0.00
147_V 58_I 0.98 0.00
74_K 151_C 0.98 0.00
188_F 147_M 0.93 0.00
55_L 115_E 0.91 0.00
85_F 52_R 0.90 0.00
199_S 148_V 0.89 0.00
188_F 164_L 0.89 0.00
271_H 162_Y 0.88 0.00
170_G 154_L 0.88 0.00
13_G 200_V 0.87 0.00
145_A 114_L 0.85 0.00
73_G 92_F 0.85 0.00
75_F 60_V 0.85 0.00
248_I 29_N 0.85 0.00
204_P 80_G 0.83 0.00
74_K 82_P 0.83 0.00
59_L 189_Q 0.82 0.00
255_I 52_R 0.82 0.00
188_F 103_R 0.82 0.00
112_V 92_F 0.81 0.00
120_L 142_A 0.81 0.00
247_L 103_R 0.80 0.00
197_G 10_K 0.79 0.00
150_T 35_N 0.79 0.00
255_I 57_S 0.79 0.00
230_P 142_A 0.79 0.00
174_F 143_S 0.78 0.00
239_V 182_V 0.78 0.00
257_M 70_I 0.78 0.00
249_I 176_L 0.77 0.00
88_G 58_I 0.77 0.00
161_I 39_N 0.77 0.00
102_A 101_R 0.77 0.00
201_L 134_D 0.76 0.00
92_D 15_S 0.76 0.00
112_V 179_E 0.75 0.00
232_W 72_V 0.75 0.00
221_I 161_F 0.74 0.00
204_P 166_G 0.74 0.00
121_L 65_Q 0.74 0.00
73_G 167_Q 0.73 0.00
263_Y 197_R 0.73 0.00
167_K 202_I 0.73 0.00
206_S 61_A 0.73 0.00
163_F 72_V 0.73 0.00
145_A 188_L 0.73 0.00
191_V 173_I 0.73 0.00
204_P 74_T 0.72 0.00
162_L 148_V 0.72 0.00
150_T 39_N 0.71 0.00
260_T 14_I 0.71 0.00
206_S 59_V 0.71 0.00
269_E 124_V 0.70 0.00
235_W 169_P 0.70 0.00
121_L 156_G 0.70 0.00
65_K 105_L 0.70 0.00
77_T 76_P 0.70 0.00
153_M 126_E 0.70 0.00
85_F 62_P 0.70 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.7574 seconds.