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OPENSEQ.org

ATP6 - ATPD
UniProt:
Length: 448
Sequences: 1187
Seq/Len: 2.75
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
221_I 77_I 1.02 0.01
47_F 119_E 1.00 0.01
206_S 83_N 0.99 0.01
212_F 114_A 0.95 0.01
111_W 89_L 0.94 0.01
220_L 168_L 0.92 0.01
113_F 28_W 0.92 0.01
149_V 153_I 0.92 0.01
160_L 25_V 0.91 0.01
54_L 30_D 0.91 0.01
17_N 57_L 0.91 0.01
157_V 81_A 0.91 0.01
65_K 131_K 0.91 0.01
244_F 131_K 0.91 0.01
118_M 155_A 0.90 0.01
78_A 55_E 0.90 0.01
144_S 76_L 0.89 0.01
86_V 65_C 0.89 0.01
58_V 25_V 0.89 0.01
63_V 76_L 0.88 0.01
190_P 73_G 0.88 0.01
84_G 55_E 0.87 0.01
254_F 120_Q 0.86 0.01
166_I 145_K 0.86 0.01
204_P 137_V 0.86 0.01
86_V 167_R 0.86 0.01
220_L 44_M 0.86 0.01
191_V 80_M 0.83 0.00
157_V 85_R 0.83 0.00
189_I 139_L 0.83 0.00
173_G 129_M 0.83 0.00
191_V 67_E 0.83 0.00
205_V 169_E 0.82 0.00
9_Q 177_S 0.82 0.00
182_P 96_F 0.82 0.00
144_S 91_D 0.81 0.00
122_P 129_M 0.81 0.00
159_I 135_R 0.81 0.00
257_M 170_R 0.81 0.00
166_I 30_D 0.80 0.00
2_A 44_M 0.80 0.00
255_I 122_L 0.79 0.00
152_S 155_A 0.79 0.00
244_F 128_A 0.79 0.00
211_L 159_V 0.79 0.00
224_L 157_D 0.79 0.00
83_I 124_K 0.78 0.00
233_S 126_S 0.78 0.00
10_D 177_S 0.78 0.00
154_A 148_M 0.78 0.00
206_S 162_G 0.77 0.00
91_K 45_A 0.77 0.00
86_V 117_L 0.77 0.00
78_A 139_L 0.77 0.00
109_F 76_L 0.76 0.00
50_V 116_A 0.76 0.00
176_K 26_E 0.76 0.00
221_I 162_G 0.76 0.00
166_I 22_H 0.76 0.00
193_L 148_M 0.75 0.00
215_M 75_N 0.74 0.00
58_V 59_E 0.74 0.00
94_Y 160_I 0.74 0.00
89_S 143_I 0.74 0.00
248_I 127_A 0.74 0.00
150_T 76_L 0.74 0.00
41_I 119_E 0.74 0.00
149_V 76_L 0.74 0.00
44_D 159_V 0.73 0.00
84_G 124_K 0.73 0.00
54_L 74_Q 0.73 0.00
3_S 177_S 0.72 0.00
223_I 16_F 0.72 0.00
155_L 121_Q 0.72 0.00
45_S 15_A 0.72 0.00
237_L 148_M 0.72 0.00
77_T 16_F 0.72 0.00
135_G 147_V 0.72 0.00
94_Y 154_R 0.72 0.00
78_A 147_V 0.72 0.00
62_S 140_N 0.72 0.00
144_S 11_Y 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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