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OPENSEQ.org

DPO3B - RNPA
UniProt:
Length: 485
Sequences: 1217
Seq/Len: 2.55
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
135_M 74_R 1.15 0.03
257_E 85_F 1.07 0.02
69_T 14_T 1.00 0.02
167_L 54_K 0.98 0.02
327_V 90_K 0.95 0.02
338_M 26_Q 0.93 0.01
269_R 65_I 0.93 0.01
242_P 59_A 0.91 0.01
43_S 35_I 0.91 0.01
348_Q 20_F 0.89 0.01
361_V 18_F 0.89 0.01
154_Y 63_N 0.88 0.01
345_S 66_K 0.87 0.01
325_L 49_L 0.87 0.01
174_G 74_R 0.86 0.01
348_Q 13_L 0.86 0.01
302_A 59_A 0.86 0.01
205_R 105_L 0.85 0.01
158_M 13_L 0.85 0.01
168_R 87_V 0.84 0.01
313_A 20_F 0.83 0.01
282_R 18_F 0.83 0.01
219_G 84_D 0.82 0.01
322_S 22_F 0.82 0.01
80_R 34_T 0.81 0.01
334_E 82_A 0.81 0.01
132_Q 109_W 0.81 0.01
32_N 36_L 0.80 0.01
242_P 11_R 0.79 0.01
160_F 103_E 0.79 0.01
365_R 50_T 0.77 0.01
335_N 86_V 0.77 0.01
18_S 18_F 0.77 0.01
3_F 12_L 0.77 0.01
51_M 104_A 0.77 0.01
75_F 45_P 0.77 0.01
223_I 86_V 0.76 0.01
55_A 80_L 0.76 0.01
135_M 50_T 0.76 0.01
172_T 11_R 0.76 0.01
159_L 71_E 0.76 0.01
80_R 28_A 0.75 0.01
25_P 57_R 0.75 0.01
271_A 97_D 0.75 0.01
152_R 22_F 0.75 0.01
328_L 25_P 0.75 0.01
142_T 93_V 0.74 0.01
217_Q 93_V 0.74 0.01
146_M 50_T 0.74 0.01
144_F 71_E 0.74 0.01
334_E 93_V 0.73 0.01
281_V 88_V 0.73 0.01
80_R 71_E 0.73 0.01
116_F 29_G 0.73 0.01
4_T 111_R 0.73 0.01
8_E 13_L 0.73 0.01
57_V 92_G 0.73 0.01
88_I 9_E 0.73 0.01
242_P 63_N 0.73 0.01
42_L 28_A 0.72 0.01
274_S 99_R 0.72 0.01
206_M 35_I 0.71 0.01
298_E 70_R 0.71 0.01
259_G 94_A 0.71 0.01
142_T 72_S 0.71 0.01
359_Y 22_F 0.71 0.01
28_P 51_V 0.71 0.01
78_I 33_I 0.71 0.01
290_L 61_E 0.71 0.01
99_V 66_K 0.70 0.01
203_L 100_A 0.70 0.01
99_V 59_A 0.70 0.01
37_V 60_H 0.70 0.01
292_I 71_E 0.70 0.01
244_Y 74_R 0.70 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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