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OPENSEQ.org
L17 - L22
UniProt: Q9Z9H5 - Q5SHP3
Length: 231
Sequences: 1231
Seq/Len: 5.38
I_Prob: 0.06
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dRW 3v2fRWContact Map
2j002j01RW 2j03RWContact Map
4juw4juxRWContact Map
4kix4kixNS 4kizNS 4kj1NS 4kj3NSContact Map
4kj54kj5NS 4kj7NS 4kj9NS 4kjbNSContact Map
4btc4btdRWContact Map
3uyd3uye0S 3uyg0SContact Map
4gd13r8sNS 3r8tNSContact Map
3ohc3ohjRW 3ohkRWContact Map
3knh3kniRW 3knkRWContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
108_G 40_N 1.06 0.06
78_K 109_E 0.80 0.03
16_H 30_E 0.70 0.02
99_K 83_K 0.68 0.02
40_K 80_P 0.68 0.02
49_D 6_I 0.65 0.01
62_A 94_D 0.62 0.01
86_R 74_A 0.62 0.01
83_I 70_Y 0.61 0.01
112_A 101_S 0.61 0.01
105_R 12_I 0.59 0.01
48_V 102_H 0.58 0.01
22_R 50_V 0.57 0.01
91_Q 94_D 0.57 0.01
38_V 81_A 0.57 0.01
62_A 35_I 0.57 0.01
25_A 50_V 0.55 0.01
54_L 107_L 0.54 0.01
81_D 45_Y 0.54 0.01
89_D 6_I 0.54 0.01
22_R 73_A 0.54 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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