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OPENSEQ.org
L17 - S04
UniProt: Q9Z9H5 - P80373
Length: 327
Sequences: 1127
Seq/Len: 3.46
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cD 3v2dR 3v2eD 3v2fRContact Map
2j002j00D 2j01R 2j02D 2j03RContact Map
4juw4juwD 4juxRContact Map
4kix4kixN 4kiyD 4kizN 4kj0D 4kj1N 4kj2D 4kj3N 4kj4DContact Map
4kj54kj5N 4kj6D 4kj7N 4kj8D 4kj9N 4kjaD 4kjbN 4kjcDContact Map
3uyd3uydG 3uye0 3uyfG 3uyg0Contact Map
4gd13r8sN 3r8tN 4gd1D 4gd2DContact Map
3knh3knhD 3kniR 3knjD 3knkRContact Map
3ohc3ohcD 3ohdD 3ohjR 3ohkRContact Map
3f1e3f1eD 3f1fR 3f1gD 3f1hRContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
82_E 140_V 0.91 0.00
89_D 128_V 0.88 0.00
58_G 97_L 0.82 0.00
112_A 95_G 0.82 0.00
14_S 185_F 0.79 0.00
9_K 183_G 0.76 0.00
48_V 65_R 0.75 0.00
117_V 92_V 0.73 0.00
87_Y 79_F 0.72 0.00
100_L 79_F 0.72 0.00
113_L 79_F 0.71 0.00
66_V 181_M 0.70 0.00
28_L 143_G 0.69 0.00
47_F 175_S 0.67 0.00
106_G 136_P 0.66 0.00
27_S 20_Y 0.66 0.00
27_S 54_Y 0.65 0.00
13_H 140_V 0.64 0.00
97_V 192_E 0.64 0.00
48_V 138_Y 0.63 0.00
98_L 108_L 0.63 0.00
89_D 56_V 0.63 0.00
106_G 152_S 0.62 0.00
72_D 47_R 0.62 0.00
61_H 181_M 0.62 0.00
81_D 174_L 0.62 0.00
70_L 76_R 0.62 0.00
28_L 53_D 0.62 0.00
69_D 171_G 0.61 0.00
50_H 124_G 0.61 0.00
9_K 19_L 0.61 0.00
79_L 204_I 0.61 0.00
70_L 156_E 0.61 0.00
7_G 78_L 0.60 0.00
30_T 89_T 0.60 0.00
109_A 206_F 0.60 0.00
111_L 160_Q 0.59 0.00
29_L 11_L 0.59 0.00
7_G 193_D 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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