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OPENSEQ.org
L17 - S02
UniProt: Q9Z9H5 - P80371
Length: 374
Sequences: 1198
Seq/Len: 3.46
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cB 3v2dR 3v2eB 3v2fRContact Map
2j002j00B 2j01R 2j02B 2j03RContact Map
4juw4juwB 4juxRContact Map
4kix4kixN 4kiyB 4kizN 4kj0B 4kj1N 4kj2B 4kj3N 4kj4BContact Map
4kj54kj5N 4kj6B 4kj7N 4kj8B 4kj9N 4kjaB 4kjbN 4kjcBContact Map
3uyd3uydE 3uye0 3uyfE 3uyg0Contact Map
4gd13r8sN 3r8tN 4gd1B 4gd2BContact Map
3ohc3ohcB 3ohdB 3ohjR 3ohkRContact Map
3knh3knhB 3kniR 3knjB 3knkRContact Map
3f1e3f1eB 3f1fR 3f1gB 3f1hRContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
52_I 37_N 0.86 0.00
67_L 140_H 0.85 0.00
49_D 31_Y 0.84 0.00
68_R 83_M 0.83 0.00
86_R 144_R 0.81 0.00
57_R 86_E 0.80 0.00
38_V 109_S 0.76 0.00
83_I 93_V 0.75 0.00
40_K 200_I 0.73 0.00
112_A 140_H 0.70 0.00
3_H 34_A 0.70 0.00
68_R 143_E 0.70 0.00
67_L 101_M 0.69 0.00
55_A 226_R 0.69 0.00
116_L 190_T 0.69 0.00
89_D 123_A 0.69 0.00
58_G 40_H 0.68 0.00
89_D 65_G 0.67 0.00
32_G 34_A 0.67 0.00
32_G 172_I 0.66 0.00
46_G 61_L 0.66 0.00
26_K 115_L 0.66 0.00
11_N 40_H 0.65 0.00
11_N 181_F 0.65 0.00
62_A 65_G 0.65 0.00
27_S 89_G 0.65 0.00
61_H 68_I 0.65 0.00
109_A 183_P 0.64 0.00
100_L 47_T 0.64 0.00
113_L 172_I 0.64 0.00
114_V 82_R 0.63 0.00
61_H 117_E 0.63 0.00
30_T 101_M 0.63 0.00
83_I 82_R 0.63 0.00
70_L 144_R 0.62 0.00
13_H 118_L 0.62 0.00
46_G 168_T 0.62 0.00
21_Y 48_M 0.62 0.00
21_Y 76_Q 0.62 0.00
44_L 30_R 0.62 0.00
35_T 128_E 0.61 0.00
44_L 92_Y 0.61 0.00
108_G 208_I 0.61 0.00
20_L 160_D 0.61 0.00
56_K 179_K 0.61 0.00
117_V 185_I 0.61 0.00
33_R 105_F 0.61 0.00
101_A 187_L 0.60 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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