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OPENSEQ.org
L17 - L32
UniProt: Q9Z9H5 - P80339
Length: 178
Sequences: 887
Seq/Len: 5.07
I_Prob: 1.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dR5 3v2fR5Contact Map
2j002j01R5 2j03R5Contact Map
4juw4juxR5Contact Map
4kix4kixN0 4kizN0 4kj1N0 4kj3N0Contact Map
4kj54kj5N0 4kj7N0 4kj9N0 4kjbN0Contact Map
2zjr2zjrKZContact Map
4btc4btdR5Contact Map
3uyd3uye05 3uyg05Contact Map
3v223v23R5 3v25R5Contact Map
4gd13r8sN0 3r8tN0Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
98_L 45_V 3.50 1.00
101_A 41_P 1.05 0.64
98_L 57_V 0.91 0.47
110_P 44_T 0.88 0.44
67_L 16_R 0.78 0.31
44_L 22_H 0.78 0.31
15_S 17_D 0.75 0.27
98_L 53_A 0.72 0.25
18_L 10_K 0.72 0.24
100_L 45_V 0.69 0.21
49_D 35_E 0.69 0.21
100_L 44_T 0.69 0.21
20_L 56_K 0.68 0.20
47_F 36_C 0.67 0.19
73_V 12_S 0.66 0.18
5_K 8_K 0.66 0.18
71_Q 53_A 0.65 0.18
101_A 38_A 0.65 0.17
101_A 40_K 0.65 0.17
29_L 9_K 0.65 0.17
61_H 10_K 0.63 0.16
113_L 45_V 0.63 0.16
95_T 13_K 0.63 0.16
13_H 37_K 0.62 0.15
11_N 9_K 0.62 0.15
33_R 7_P 0.62 0.15
30_T 32_P 0.61 0.14
11_N 17_D 0.61 0.14
98_L 44_T 0.61 0.14
77_R 15_R 0.61 0.14
53_H 4_H 0.60 0.14
83_I 14_A 0.59 0.13
81_D 35_E 0.59 0.13
76_V 47_P 0.58 0.12
57_R 39_M 0.58 0.12
95_T 55_R 0.58 0.12
75_L 37_K 0.58 0.12
7_G 19_R 0.58 0.12
56_K 6_V 0.56 0.11
116_L 26_T 0.56 0.11
98_L 24_A 0.56 0.10
26_K 13_K 0.56 0.10
25_A 23_H 0.55 0.10
80_F 19_R 0.55 0.10
21_Y 39_M 0.55 0.10
88_R 25_L 0.55 0.10
73_V 19_R 0.55 0.10
32_G 45_V 0.55 0.10
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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