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OPENSEQ.org
L17 - L21
UniProt: Q9Z9H5 - P60492
Length: 219
Sequences: 1231
Seq/Len: 5.62
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dRV 3v2fRVContact Map
2j002j01RV 2j03RVContact Map
4juw4juxRVContact Map
4kix4kixNR 4kizNR 4kj1NR 4kj3NRContact Map
4kj54kj5NR 4kj7NR 4kj9NR 4kjbNRContact Map
2zjr2zjrKOContact Map
4btc4btdRVContact Map
3uyd3uye02 3uyg02Contact Map
3v223v23RV 3v25RVContact Map
4gd13r8sNR 3r8tNRContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
52_I 70_I 0.79 0.00
40_K 72_V 0.74 0.00
86_R 66_R 0.68 0.00
89_D 38_L 0.65 0.00
35_T 91_Y 0.64 0.00
22_R 33_V 0.64 0.00
38_V 100_R 0.64 0.00
88_R 67_G 0.63 0.00
35_T 30_G 0.60 0.00
31_H 94_L 0.59 0.00
114_V 60_E 0.58 0.00
83_I 40_L 0.57 0.00
95_T 2_F 0.57 0.00
44_L 60_E 0.57 0.00
68_R 4_I 0.56 0.00
86_R 1_M 0.56 0.00
82_E 17_G 0.55 0.00
2_R 75_F 0.55 0.00
70_L 91_Y 0.54 0.00
110_P 8_G 0.54 0.00
100_L 6_K 0.53 0.00
82_E 38_L 0.53 0.00
59_D 98_E 0.53 0.00
13_H 49_T 0.53 0.00
89_D 58_V 0.53 0.00
100_L 64_H 0.52 0.00
50_H 93_E 0.52 0.00
111_L 64_H 0.52 0.00
81_D 56_S 0.52 0.00
9_K 5_V 0.52 0.00
28_L 13_R 0.51 0.00
45_R 57_V 0.51 0.00
33_R 73_S 0.51 0.00
29_L 12_Y 0.51 0.00
48_V 46_V 0.51 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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