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OPENSEQ.org
L17 - L20
UniProt: Q9Z9H5 - P60491
Length: 236
Sequences: 1116
Seq/Len: 4.75
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dRU 3v2fRUContact Map
2j002j01RU 2j03RUContact Map
4juw4juxRUContact Map
4kix4kixNQ 4kizNQ 4kj1NQ 4kj3NQContact Map
4kj54kj5NQ 4kj7NQ 4kj9NQ 4kjbNQContact Map
2zjr2zjrKNContact Map
4btc4btdRUContact Map
3uyd3uye01 3uyg01Contact Map
3v223v23RU 3v25RUContact Map
4gd13r8sNQ 3r8tNQContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
7_G 6_T 0.90 0.01
83_I 75_N 0.80 0.00
95_T 59_R 0.75 0.00
29_L 9_V 0.75 0.00
114_V 89_E 0.72 0.00
84_A 79_F 0.71 0.00
32_G 93_K 0.69 0.00
8_R 14_H 0.69 0.00
34_I 18_L 0.68 0.00
78_K 33_R 0.68 0.00
9_K 75_N 0.67 0.00
77_R 91_D 0.66 0.00
110_P 100_V 0.65 0.00
118_E 41_A 0.65 0.00
111_L 18_L 0.63 0.00
70_L 90_V 0.63 0.00
117_V 101_R 0.62 0.00
65_L 86_A 0.62 0.00
113_L 73_G 0.61 0.00
101_A 47_Y 0.60 0.00
84_A 65_I 0.60 0.00
85_P 114_K 0.59 0.00
66_V 25_W 0.59 0.00
98_L 107_A 0.59 0.00
18_L 55_R 0.58 0.00
47_F 96_A 0.58 0.00
67_L 90_V 0.58 0.00
35_T 109_L 0.58 0.00
88_R 111_E 0.58 0.00
100_L 103_P 0.57 0.00
62_A 90_V 0.57 0.00
74_K 116_A 0.57 0.00
33_R 108_E 0.56 0.00
46_G 63_V 0.56 0.00
51_L 32_F 0.56 0.00
52_I 51_K 0.56 0.00
44_L 98_L 0.55 0.00
78_K 51_K 0.55 0.00
113_L 27_L 0.55 0.00
44_L 88_I 0.55 0.00
60_L 32_F 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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