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OPENSEQ.org
L10 - S15
UniProt: Q8VVE3 - Q5SJ76
Length: 262
Sequences: 1339
Seq/Len: 5.19
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00O 2j01J 2j02O 2j03JContact Map
4kix4kix5 4kiyO 4kiz5 4kj0O 4kj15 4kj2O 4kj4OContact Map
4kj54kj55 4kj6O 4kj8O 4kj95 4kjaO 4kjcOContact Map
3i8f3i8gR 3i8hR 3i8iYContact Map
3sfs3sfsO 3sgfHContact Map
3d5a3d5aO 3d5bJ 3d5cO 3d5dJContact Map
3kiq3kiqo 3kirJ 3kiso 3kitJContact Map
3pys3pysO 3pytI 3pyuO 3pyvIContact Map
3pyn3pynO 3pyoI 3pyqO 3pyrIContact Map
3kiu3kiuo 3kiwJ 3kixo 3kiyJContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
134_L 87_I 0.73 0.00
108_K 29_V 0.69 0.00
12_T 22_T 0.67 0.00
59_I 43_L 0.64 0.00
94_V 16_A 0.64 0.00
143_Q 31_L 0.64 0.00
55_K 35_R 0.63 0.00
171_K 68_R 0.63 0.00
51_L 65_R 0.62 0.00
18_E 17_R 0.62 0.00
77_P 61_G 0.62 0.00
135_R 48_K 0.61 0.00
73_G 14_E 0.61 0.00
95_Q 70_L 0.61 0.00
52_F 5_K 0.61 0.00
97_A 62_Q 0.61 0.00
149_L 48_K 0.60 0.00
129_P 32_L 0.60 0.00
140_G 35_R 0.60 0.00
66_L 43_L 0.60 0.00
128_L 59_M 0.60 0.00
116_I 14_E 0.59 0.00
100_N 46_H 0.59 0.00
150_V 21_D 0.59 0.00
66_L 25_T 0.58 0.00
13_L 24_S 0.58 0.00
56_N 55_G 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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