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OPENSEQ.org
L10 - S05
UniProt: Q8VVE3 - Q5SHQ5
Length: 335
Sequences: 1211
Seq/Len: 3.71
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00E 2j01J 2j02E 2j03JContact Map
4kix4kix5 4kiyE 4kiz5 4kj0E 4kj15 4kj2E 4kj4EContact Map
4kj54kj55 4kj6E 4kj8E 4kj95 4kjaE 4kjcEContact Map
3i8f3i8gH 3i8hH 3i8iYContact Map
3sfs3sfsE 3sgfHContact Map
3d5a3d5aE 3d5bJ 3d5cE 3d5dJContact Map
3kiq3kiqe 3kirJ 3kise 3kitJContact Map
3pys3pysE 3pytI 3pyuE 3pyvIContact Map
3pyn3pynE 3pyoI 3pyqE 3pyrIContact Map
3kiu3kiue 3kiwJ 3kixe 3kiyJContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
142_L 73_N 0.98 0.01
120_K 141_Q 0.84 0.01
129_P 56_Q 0.78 0.01
15_E 40_R 0.77 0.01
17_L 13_I 0.77 0.01
84_E 17_A 0.77 0.01
97_A 138_A 0.76 0.01
118_T 90_V 0.76 0.01
62_A 11_I 0.75 0.01
94_V 138_A 0.74 0.01
49_A 71_L 0.72 0.01
11_A 118_I 0.72 0.01
55_K 66_M 0.71 0.01
27_V 125_S 0.70 0.01
132_D 76_I 0.70 0.01
108_K 26_F 0.69 0.01
7_V 115_V 0.69 0.01
67_G 117_D 0.68 0.01
56_N 46_G 0.68 0.01
78_S 10_M 0.67 0.00
93_L 135_T 0.67 0.00
24_F 48_A 0.66 0.00
28_N 126_R 0.66 0.00
131_M 138_A 0.65 0.00
58_L 16_T 0.65 0.00
131_M 45_F 0.65 0.00
158_R 120_T 0.65 0.00
27_V 7_E 0.64 0.00
81_V 154_G 0.64 0.00
113_Q 150_R 0.64 0.00
12_T 69_V 0.64 0.00
29_Y 129_I 0.64 0.00
64_K 40_R 0.63 0.00
8_E 83_E 0.63 0.00
108_K 93_P 0.63 0.00
154_G 71_L 0.63 0.00
59_I 144_T 0.62 0.00
89_A 45_F 0.62 0.00
66_L 117_D 0.62 0.00
28_N 89_I 0.62 0.00
50_R 77_P 0.62 0.00
107_V 140_R 0.62 0.00
3_N 105_V 0.61 0.00
95_Q 89_I 0.61 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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