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OPENSEQ.org
L10 - S11
UniProt: Q8VVE3 - P80376
Length: 302
Sequences: 1174
Seq/Len: 3.97
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00K 2j01J 2j02K 2j03JContact Map
4kix4kix5 4kiyK 4kiz5 4kj0K 4kj15 4kj2K 4kj4KContact Map
4kj54kj55 4kj6K 4kj8K 4kj95 4kjaK 4kjcKContact Map
3i8f3i8gN 3i8hN 3i8iYContact Map
3sfs3sfsK 3sgfHContact Map
3d5a3d5aK 3d5bJ 3d5cK 3d5dJContact Map
3kiq3kiqk 3kirJ 3kisk 3kitJContact Map
3pys3pysK 3pytI 3pyuK 3pyvIContact Map
3pyn3pynK 3pyoI 3pyqK 3pyrIContact Map
3kiu3kiuk 3kiwJ 3kixk 3kiyJContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
119_A 14_V 1.05 0.03
57_T 122_K 0.88 0.02
126_A 100_A 0.88 0.02
106_Q 15_A 0.85 0.02
97_A 19_A 0.81 0.01
54_A 51_K 0.74 0.01
37_T 5_P 0.74 0.01
148_E 3_K 0.73 0.01
74_L 59_Y 0.72 0.01
130_T 59_Y 0.72 0.01
118_T 11_K 0.71 0.01
103_G 74_A 0.70 0.01
128_L 24_S 0.70 0.01
18_E 103_L 0.70 0.01
57_T 124_K 0.68 0.01
90_A 29_I 0.68 0.01
9_L 24_S 0.67 0.01
49_A 73_M 0.67 0.01
100_N 53_S 0.67 0.01
123_E 109_V 0.67 0.01
167_Y 59_Y 0.66 0.01
60_R 107_S 0.66 0.01
141_V 97_A 0.66 0.01
93_L 29_I 0.66 0.01
26_L 53_S 0.66 0.01
115_Q 9_K 0.66 0.01
31_G 66_L 0.66 0.01
19_R 70_K 0.66 0.01
9_L 97_A 0.65 0.01
6_N 20_Y 0.65 0.01
114_G 82_V 0.65 0.01
100_N 54_R 0.65 0.01
129_P 114_V 0.64 0.01
108_K 95_I 0.64 0.01
129_P 34_D 0.64 0.01
36_E 106_K 0.64 0.01
12_T 4_K 0.64 0.01
21_Q 24_S 0.63 0.01
59_I 45_G 0.63 0.01
132_D 104_Q 0.63 0.01
92_T 51_K 0.62 0.01
119_A 75_Y 0.62 0.01
164_L 30_V 0.62 0.01
66_L 54_R 0.62 0.01
125_L 31_T 0.61 0.01
30_Q 12_R 0.61 0.01
141_V 23_A 0.61 0.01
146_M 32_I 0.61 0.01
50_R 99_Q 0.61 0.01
160_L 38_N 0.61 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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