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OPENSEQ.org
L10 - L20
UniProt: Q8VVE3 - P60491
Length: 291
Sequences: 1258
Seq/Len: 4.40
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01JU 2j03JUContact Map
4kix4kix5Q 4kiz5Q 4kj15Q 4kj3QContact Map
4kj54kj55Q 4kj7Q 4kj95Q 4kjbQContact Map
3i8f3i8f1 3i8iY1Contact Map
3sfs3sgfHUContact Map
3d5a3d5bJU 3d5dJUContact Map
3kiq3kirJU 3kitJUContact Map
3pys3pytIQ 3pyvIQContact Map
3pyn3pyoIQ 3pyrIQContact Map
3kiu3kiwJU 3kiyJUContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
119_A 51_K 0.80 0.00
103_G 22_K 0.79 0.00
79_A 25_W 0.79 0.00
99_S 78_T 0.78 0.00
146_M 40_F 0.73 0.00
10_L 7_G 0.71 0.00
129_P 7_G 0.71 0.00
51_L 47_Y 0.70 0.00
125_L 98_L 0.69 0.00
84_E 47_Y 0.69 0.00
115_Q 79_F 0.69 0.00
75_Q 111_E 0.69 0.00
147_A 33_R 0.69 0.00
27_V 4_A 0.68 0.00
45_K 51_K 0.67 0.00
135_R 25_W 0.66 0.00
36_E 110_V 0.65 0.00
28_N 27_L 0.65 0.00
16_N 59_R 0.64 0.00
63_L 11_R 0.64 0.00
19_R 68_A 0.63 0.00
50_R 74_L 0.62 0.00
83_Y 13_K 0.62 0.00
34_A 38_T 0.62 0.00
78_S 93_K 0.62 0.00
78_S 59_R 0.62 0.00
121_D 79_F 0.62 0.00
142_L 103_P 0.62 0.00
44_L 14_H 0.62 0.00
47_N 72_H 0.61 0.00
7_V 71_Q 0.61 0.00
7_V 79_F 0.61 0.00
159_E 13_K 0.61 0.00
52_F 105_V 0.61 0.00
98_K 114_K 0.61 0.00
112_L 13_K 0.60 0.00
49_A 24_Y 0.60 0.00
149_L 41_A 0.60 0.00
143_Q 6_T 0.59 0.00
78_S 110_V 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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