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OPENSEQ.org
L07 - L22
UniProt: Q8VVE2 - Q5SHP3
Length: 238
Sequences: 1320
Seq/Len: 5.59
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01LW 2j03LWContact Map
4kix4kix6S 4kizS 4kj1S 4kj3SContact Map
3i8f3i8fS 3i8iIJSContact Map
3sfs3sgfLKMJWContact Map
2zjq2zjq5PContact Map
4kd84kd9eW 4kdbeWContact Map
4kcy4kczeW 4kd2eWContact Map
3uoq3uosKLMJWContact Map
4kbt4kbueW 4kbweWContact Map
4kdg4kdheW 4kdkeWContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
91_D 37_R 0.81 0.00
94_E 90_R 0.74 0.00
70_K 44_A 0.66 0.00
25_D 85_V 0.62 0.00
17_V 59_V 0.60 0.00
116_E 59_V 0.59 0.00
102_G 44_A 0.58 0.00
50_A 105_V 0.57 0.00
72_L 90_R 0.56 0.00
68_G 74_A 0.56 0.00
42_A 87_P 0.56 0.00
113_K 81_A 0.55 0.00
70_K 31_E 0.55 0.00
2_A 90_R 0.54 0.00
102_G 56_A 0.54 0.00
45_P 51_L 0.53 0.00
99_V 23_L 0.52 0.00
34_T 13_S 0.50 0.00
83_G 35_I 0.50 0.00
27_L 51_L 0.50 0.00
27_L 15_R 0.50 0.00
80_A 64_M 0.49 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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