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OPENSEQ.org
L07 - L23
UniProt: Q8VVE2 - Q5SHP0
Length: 221
Sequences: 1378
Seq/Len: 6.35
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01LX 2j03LXContact Map
4kix4kix6T 4kizT 4kj1T 4kj3TContact Map
3i8f3i8fT 3i8iIJTContact Map
3sfs3sgfLKMJXContact Map
2zjq2zjq5QContact Map
4kd84kd9eX 4kdbeXContact Map
4kcy4kczeX 4kd2eXContact Map
3uoq3uosKLMJXContact Map
4kbt4kbueX 4kbweXContact Map
4kdg4kdheX 4kdkeXContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
24_I 29_W 0.79 0.00
122_V 17_A 0.72 0.00
12_L 76_R 0.68 0.00
30_A 25_K 0.64 0.00
40_A 75_D 0.62 0.00
20_L 67_G 0.61 0.00
7_R 72_K 0.60 0.00
43_A 72_K 0.59 0.00
69_A 60_R 0.58 0.00
111_I 66_L 0.57 0.00
52_A 43_V 0.56 0.00
94_E 22_A 0.56 0.00
4_D 21_F 0.55 0.00
114_K 55_N 0.54 0.00
100_K 14_S 0.53 0.00
72_L 88_K 0.53 0.00
13_S 92_L 0.53 0.00
8_I 46_A 0.52 0.00
10_E 2_K 0.51 0.00
57_K 26_Y 0.50 0.00
94_E 76_R 0.50 0.00
70_K 55_N 0.50 0.00
124_L 72_K 0.50 0.00
106_Q 72_K 0.50 0.00
27_L 29_W 0.50 0.00
13_S 24_G 0.49 0.00
124_L 62_K 0.49 0.00
83_G 22_A 0.49 0.00
93_A 42_A 0.49 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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