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OPENSEQ.org
L07 - L16
UniProt: Q8VVE2 - P60489
Length: 266
Sequences: 1162
Seq/Len: 4.42
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01LQ 2j03LQContact Map
4kix4kix6M 4kizM 4kj1M 4kj3MContact Map
3i8f3i8fP 3i8iIJPContact Map
3sfs3sgfLKMJQContact Map
2zjq2zjq5JContact Map
4kd84kd9eQ 4kdbeQContact Map
4kcy4kczeQ 4kd2eQContact Map
3uoq3uosKLMJQContact Map
4kbt4kbueQ 4kbweQContact Map
4kdg4kdheQ 4kdkeQContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
94_E 106_V 0.79 0.00
74_V 78_P 0.75 0.00
113_K 44_A 0.71 0.00
21_K 81_V 0.70 0.00
88_E 38_E 0.70 0.00
2_A 74_Y 0.69 0.00
79_R 11_K 0.69 0.00
7_R 113_Q 0.67 0.00
23_L 41_W 0.61 0.00
66_E 38_E 0.61 0.00
77_E 108_G 0.61 0.00
12_L 106_V 0.61 0.00
32_G 49_A 0.59 0.00
83_G 125_L 0.58 0.00
15_A 104_F 0.57 0.00
94_E 136_A 0.57 0.00
117_A 112_E 0.57 0.00
17_V 92_G 0.56 0.00
8_I 74_Y 0.56 0.00
27_L 74_Y 0.55 0.00
27_L 17_L 0.55 0.00
47_A 12_Q 0.54 0.00
89_A 32_Y 0.54 0.00
3_L 85_K 0.54 0.00
3_L 104_F 0.54 0.00
70_K 20_A 0.53 0.00
123_E 133_R 0.53 0.00
8_I 104_F 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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