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OPENSEQ.org
L09 - L35
UniProt: Q5SLQ1 - Q5SKU1
Length: 213
Sequences: 1395
Seq/Len: 6.61
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dI8 3v2fI8Contact Map
2j002j01I8 2j03I8Contact Map
4kix4kixH3 4kizH3 4kj1H3 4kj3H3Contact Map
4kj54kj5H3 4kj7H3 4kj9H3 4kjbH3Contact Map
3uyd3uyeK8 3uygK8Contact Map
3v223v23I8 3v25I8Contact Map
4gd13r8sH3 3r8tH3Contact Map
3uz63uz8K8 3uz9K8Contact Map
3knh3kniI8 3knkI8Contact Map
3ohc3ohjI8 3ohkI8Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
81_V 30_R 0.82 0.00
117_E 53_P 0.77 0.00
43_N 45_G 0.73 0.00
96_D 15_K 0.73 0.00
2_K 56_E 0.73 0.00
27_R 30_R 0.71 0.00
86_T 42_R 0.70 0.00
75_L 4_M 0.69 0.00
41_E 19_S 0.66 0.00
92_V 51_A 0.65 0.00
71_I 61_L 0.65 0.00
12_L 1_M 0.63 0.00
130_Y 52_K 0.62 0.00
128_L 11_K 0.61 0.00
27_R 63_P 0.61 0.00
37_V 15_K 0.60 0.00
27_R 8_K 0.60 0.00
2_K 60_L 0.60 0.00
81_V 8_K 0.59 0.00
31_L 51_A 0.59 0.00
112_K 43_Q 0.58 0.00
34_G 29_K 0.58 0.00
108_T 19_S 0.58 0.00
83_A 56_E 0.57 0.00
48_E 18_A 0.57 0.00
55_A 45_G 0.57 0.00
18_V 4_M 0.57 0.00
128_L 8_K 0.57 0.00
29_Y 38_G 0.56 0.00
89_Y 44_K 0.56 0.00
93_T 7_H 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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