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OPENSEQ.org
L09 - L36
UniProt: Q5SLQ1 - Q5SHR2
Length: 185
Sequences: 1020
Seq/Len: 5.54
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dI9 3v2fI9Contact Map
2j002j01I9 2j03I9Contact Map
4kix4kixH4 4kizH4 4kj1H4 4kj3H4Contact Map
4kj54kj5H4 4kj7H4 4kj9H4 4kjbH4Contact Map
3v223v23I9 3v25I9Contact Map
4gd13r8sH4 3r8tH4Contact Map
3knh3kniI9 3knkI9Contact Map
3v263v27I9 3v29I9Contact Map
3huw3huxI9 3huzI9Contact Map
1nkw1nkwF4Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
58_L 31_K 1.00 0.03
98_A 15_K 0.88 0.02
115_A 15_K 0.88 0.02
118_K 12_D 0.86 0.02
142_V 7_V 0.86 0.02
121_K 18_R 0.82 0.01
87_K 25_V 0.77 0.01
47_L 24_Y 0.76 0.01
143_S 28_E 0.75 0.01
44_L 18_R 0.72 0.01
142_V 20_H 0.72 0.01
75_L 22_R 0.71 0.01
76_T 35_R 0.69 0.01
98_A 12_D 0.69 0.01
59_A 35_R 0.66 0.01
65_A 33_K 0.65 0.01
4_I 17_I 0.65 0.01
55_A 25_V 0.64 0.01
42_S 22_R 0.64 0.01
92_V 12_D 0.64 0.01
16_G 11_C 0.63 0.01
47_L 22_R 0.62 0.01
16_G 7_V 0.62 0.01
135_E 25_V 0.61 0.01
54_Q 24_Y 0.61 0.01
71_I 20_H 0.61 0.01
16_G 27_C 0.61 0.01
95_K 31_K 0.60 0.01
57_R 10_I 0.60 0.01
113_R 12_D 0.60 0.01
31_L 10_I 0.59 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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