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OPENSEQ.org
L09 - L15
UniProt: Q5SLQ1 - Q5SHQ7
Length: 298
Sequences: 1479
Seq/Len: 5.10
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dIP 3v2fIPContact Map
2j002j01IP 2j03IPContact Map
4kix4kixHL 4kizHL 4kj1HL 4kj3HLContact Map
4kj54kj5HL 4kj7HL 4kj9HL 4kjbHLContact Map
3uyd3uyeKO 3uygKOContact Map
4gd13r8sHL 3r8tHLContact Map
3knh3kniIP 3knkIPContact Map
3ohc3ohjIP 3ohkIPContact Map
3f1e3f1fIP 3f1hIPContact Map
3ohy3ohzIP 3oi1IPContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
88_I 92_E 0.91 0.01
31_L 5_D 0.80 0.01
17_Q 130_F 0.77 0.01
133_H 23_P 0.70 0.00
64_E 40_S 0.69 0.00
86_T 138_L 0.69 0.00
140_L 91_F 0.67 0.00
84_G 117_E 0.67 0.00
96_D 131_S 0.66 0.00
3_V 3_L 0.66 0.00
3_V 38_Q 0.64 0.00
57_R 137_K 0.64 0.00
25_Y 60_M 0.63 0.00
133_H 39_K 0.63 0.00
89_Y 13_N 0.61 0.00
106_G 118_G 0.61 0.00
69_K 110_Y 0.61 0.00
46_A 106_L 0.60 0.00
114_L 19_V 0.60 0.00
136_V 77_R 0.59 0.00
69_K 65_R 0.59 0.00
31_L 50_R 0.59 0.00
140_L 39_K 0.58 0.00
47_L 113_K 0.58 0.00
2_K 46_K 0.58 0.00
111_P 56_S 0.58 0.00
6_L 29_K 0.58 0.00
128_L 81_Q 0.58 0.00
49_A 40_S 0.57 0.00
36_A 141_A 0.57 0.00
135_E 62_L 0.57 0.00
144_V 85_L 0.57 0.00
119_P 18_R 0.57 0.00
115_A 98_E 0.57 0.00
1_M 3_L 0.56 0.00
128_L 48_P 0.56 0.00
3_V 42_S 0.56 0.00
3_V 147_L 0.56 0.00
16_G 62_L 0.56 0.00
101_L 7_R 0.56 0.00
113_R 131_S 0.56 0.00
3_V 6_L 0.56 0.00
101_L 123_L 0.55 0.00
50_R 38_Q 0.55 0.00
88_I 76_K 0.55 0.00
55_A 87_D 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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