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OPENSEQ.org

L09 - L30
UniProt: Q5SLQ1 - Q5SHQ6
Length: 208
Sequences: 1208
Seq/Len: 5.84
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dI3 3v2fI3Contact Map
2j002j01I3 2j03I3Contact Map
4kix4kixHZ 4kizHZ 4kj1HZ 4kj3HZContact Map
4kj54kj5HZ 4kj7HZ 4kj9HZ 4kjbHZContact Map
3uyd3uyeKX 3uygKXContact Map
4gd13r8sHZ 3r8tHZContact Map
3ohc3ohjI3 3ohkI3Contact Map
3knh3kniI3 3knkI3Contact Map
3f1e3f1fI3 3f1hI3Contact Map
3ohy3ohzI3 3oi1I3Contact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
119_P 32_Q 0.86 0.00
86_T 6_V 0.80 0.00
134_P 6_V 0.76 0.00
16_G 14_G 0.72 0.00
91_S 49_K 0.71 0.00
17_Q 3_R 0.69 0.00
92_V 17_K 0.68 0.00
31_L 60_E 0.64 0.00
23_P 53_L 0.64 0.00
87_K 57_E 0.63 0.00
85_E 9_V 0.63 0.00
84_G 46_N 0.63 0.00
51_I 46_N 0.63 0.00
6_L 46_N 0.62 0.00
87_K 34_E 0.61 0.00
87_K 51_A 0.61 0.00
38_L 8_L 0.60 0.00
26_A 51_A 0.59 0.00
84_G 11_S 0.58 0.00
112_K 58_V 0.57 0.00
10_E 23_L 0.57 0.00
83_A 21_A 0.57 0.00
144_V 24_K 0.57 0.00
34_G 47_V 0.57 0.00
48_E 31_L 0.56 0.00
65_A 2_P 0.55 0.00
42_S 6_V 0.54 0.00
72_L 11_S 0.54 0.00
89_Y 7_K 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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