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OPENSEQ.org
L09 - L29
UniProt: Q5SLQ1 - Q5SHP6
Length: 220
Sequences: 1353
Seq/Len: 6.41
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dI2 3v2fI2Contact Map
2j002j01I2 2j03I2Contact Map
4kix4kixHY 4kizHY 4kj1HY 4kj3HYContact Map
4kj54kj5HY 4kj7HY 4kj9HY 4kjbHYContact Map
3uyd3uyeKW 3uygKWContact Map
4gd13r8sHY 3r8tHYContact Map
3ohc3ohjI2 3ohkI2Contact Map
3knh3kniI2 3knkI2Contact Map
3ohy3ohzI2 3oi1I2Contact Map
3f1e3f1fI2 3f1hI2Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
106_G 55_R 0.85 0.00
136_V 54_K 0.82 0.00
110_D 32_L 0.81 0.00
9_L 20_E 0.79 0.00
121_K 46_Q 0.72 0.00
4_I 64_L 0.71 0.00
83_A 37_F 0.69 0.00
43_N 55_R 0.67 0.00
37_V 60_L 0.66 0.00
91_S 34_E 0.65 0.00
9_L 59_R 0.65 0.00
130_Y 22_E 0.65 0.00
31_L 34_E 0.64 0.00
88_I 9_Q 0.64 0.00
80_P 19_V 0.63 0.00
44_L 12_E 0.63 0.00
54_Q 29_K 0.62 0.00
141_K 20_E 0.62 0.00
49_A 23_K 0.62 0.00
125_E 45_S 0.61 0.00
59_A 17_S 0.61 0.00
122_E 63_V 0.61 0.00
112_K 32_L 0.61 0.00
79_I 23_K 0.60 0.00
74_N 17_S 0.60 0.00
86_T 42_G 0.60 0.00
88_I 28_K 0.58 0.00
101_L 9_Q 0.58 0.00
120_I 53_L 0.58 0.00
79_I 8_K 0.58 0.00
109_I 59_R 0.57 0.00
36_A 61_L 0.57 0.00
7_E 71_N 0.57 0.00
38_L 11_E 0.56 0.00
79_I 53_L 0.56 0.00
86_T 61_L 0.56 0.00
137_P 23_K 0.56 0.00
23_P 60_L 0.56 0.00
26_A 60_L 0.55 0.00
11_N 62_T 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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