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OPENSEQ.org
L09 - S13
UniProt: Q5SLQ1 - P80377
Length: 274
Sequences: 1382
Seq/Len: 5.12
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cM 3v2dI 3v2eM 3v2fIContact Map
2j002j00M 2j01I 2j02M 2j03IContact Map
4kix4kixH 4kiyM 4kizH 4kj0M 4kj1H 4kj2M 4kj3H 4kj4MContact Map
4kj54kj5H 4kj6M 4kj7H 4kj8M 4kj9H 4kjaM 4kjbH 4kjcMContact Map
3uyd3uydP 3uyeK 3uyfP 3uygKContact Map
4gd13r8sH 3r8tH 4gd1M 4gd2MContact Map
3ohc3ohcM 3ohdM 3ohjI 3ohkIContact Map
3knh3knhM 3kniI 3knjM 3knkIContact Map
3ohy3ohyM 3ohzI 3oi0M 3oi1IContact Map
3f1e3f1eM 3f1fI 3f1gM 3f1hIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
80_P 12_N 0.83 0.00
77_L 51_A 0.76 0.00
92_V 40_N 0.74 0.00
110_D 98_V 0.72 0.00
27_R 102_R 0.72 0.00
54_Q 30_A 0.71 0.00
10_E 46_K 0.71 0.00
38_L 18_A 0.70 0.00
45_K 53_V 0.70 0.00
27_R 113_P 0.69 0.00
15_V 84_I 0.68 0.00
141_K 99_R 0.66 0.00
22_K 115_K 0.66 0.00
10_E 18_A 0.66 0.00
4_I 57_R 0.66 0.00
37_V 25_I 0.65 0.00
25_Y 32_E 0.64 0.00
123_L 42_A 0.64 0.00
7_E 43_T 0.64 0.00
88_I 114_R 0.63 0.00
6_L 45_V 0.63 0.00
49_A 99_R 0.63 0.00
50_R 77_N 0.63 0.00
18_V 20_T 0.63 0.00
54_Q 94_R 0.62 0.00
60_E 18_A 0.62 0.00
89_Y 104_R 0.62 0.00
70_E 64_W 0.62 0.00
110_D 7_V 0.61 0.00
17_Q 56_L 0.61 0.00
114_L 113_P 0.61 0.00
94_A 11_R 0.60 0.00
130_Y 74_V 0.60 0.00
81_V 84_I 0.60 0.00
130_Y 59_Y 0.60 0.00
91_S 82_M 0.60 0.00
140_L 103_T 0.59 0.00
58_L 56_L 0.59 0.00
128_L 48_L 0.59 0.00
128_L 5_A 0.59 0.00
69_K 62_N 0.58 0.00
3_V 53_V 0.58 0.00
44_L 88_R 0.58 0.00
73_E 49_T 0.57 0.00
64_E 56_L 0.57 0.00
81_V 50_E 0.57 0.00
22_K 75_A 0.57 0.00
126_Y 95_G 0.57 0.00
23_P 52_E 0.57 0.00
140_L 12_N 0.56 0.00
33_R 53_V 0.56 0.00
127_V 56_L 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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