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OPENSEQ.org

L09 - L32
UniProt: Q5SLQ1 - P80339
Length: 208
Sequences: 1169
Seq/Len: 5.73
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dI5 3v2fI5Contact Map
2j002j01I5 2j03I5Contact Map
4kix4kixH0 4kizH0 4kj1H0 4kj3H0Contact Map
4kj54kj5H0 4kj7H0 4kj9H0 4kjbH0Contact Map
3uyd3uyeK5 3uygK5Contact Map
3v223v23I5 3v25I5Contact Map
4gd13r8sH0 3r8tH0Contact Map
3uz63uz8K5 3uz9K5Contact Map
3ohc3ohjI5 3ohkI5Contact Map
3knh3kniI5 3knkI5Contact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
96_D 37_K 0.95 0.01
89_Y 4_H 0.82 0.01
72_L 60_V 0.80 0.01
26_A 10_K 0.78 0.01
54_Q 17_D 0.77 0.01
82_R 20_R 0.76 0.01
91_S 10_K 0.75 0.01
57_R 46_C 0.75 0.01
3_V 32_P 0.75 0.01
88_I 30_L 0.73 0.01
23_P 33_C 0.73 0.01
9_L 39_M 0.71 0.01
117_E 55_R 0.71 0.01
141_K 57_V 0.70 0.01
40_T 25_L 0.70 0.01
92_V 34_P 0.69 0.01
88_I 5_P 0.69 0.01
86_T 45_V 0.68 0.01
77_L 29_T 0.67 0.01
147_Q 41_P 0.67 0.01
102_S 29_T 0.67 0.01
105_H 41_P 0.66 0.01
17_Q 29_T 0.66 0.01
72_L 53_A 0.66 0.01
84_G 44_T 0.66 0.01
31_L 30_L 0.66 0.01
87_K 9_K 0.64 0.01
88_I 4_H 0.64 0.01
31_L 54_G 0.64 0.01
48_E 38_A 0.62 0.01
84_G 28_P 0.61 0.01
126_Y 34_P 0.61 0.01
23_P 46_C 0.61 0.01
46_A 57_V 0.61 0.01
130_Y 51_Y 0.61 0.01
4_I 38_A 0.60 0.01
99_E 32_P 0.59 0.01
34_G 53_A 0.58 0.01
101_L 9_K 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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