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OPENSEQ.org
L09 - L20
UniProt: Q5SLQ1 - P60491
Length: 266
Sequences: 1381
Seq/Len: 5.23
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dIU 3v2fIUContact Map
2j002j01IU 2j03IUContact Map
4kix4kixHQ 4kizHQ 4kj1HQ 4kj3HQContact Map
4kj54kj5HQ 4kj7HQ 4kj9HQ 4kjbHQContact Map
3uyd3uyeK1 3uygK1Contact Map
3v223v23IU 3v25IUContact Map
4gd13r8sHQ 3r8tHQContact Map
3uz63uz8K1 3uz9K1Contact Map
3knh3kniIU 3knkIUContact Map
3ohc3ohjIU 3ohkIUContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
14_D 91_D 0.92 0.01
26_A 68_A 0.89 0.01
22_K 4_A 0.80 0.01
133_H 25_W 0.77 0.01
82_R 53_R 0.75 0.01
6_L 14_H 0.74 0.01
134_P 14_H 0.71 0.00
12_L 28_R 0.70 0.00
93_T 32_F 0.69 0.00
94_A 51_K 0.67 0.00
15_V 91_D 0.67 0.00
96_D 42_A 0.67 0.00
20_D 72_H 0.66 0.00
96_D 30_K 0.65 0.00
14_D 5_K 0.64 0.00
83_A 8_V 0.64 0.00
138_I 38_T 0.64 0.00
96_D 21_A 0.64 0.00
29_Y 9_V 0.64 0.00
41_E 24_Y 0.62 0.00
14_D 20_L 0.62 0.00
39_A 93_K 0.61 0.00
29_Y 14_H 0.61 0.00
8_P 91_D 0.61 0.00
121_K 75_N 0.61 0.00
111_P 84_K 0.60 0.00
128_L 89_E 0.60 0.00
78_T 55_R 0.60 0.00
56_K 108_E 0.60 0.00
88_I 16_K 0.59 0.00
36_A 44_N 0.59 0.00
118_K 43_G 0.58 0.00
22_K 14_H 0.58 0.00
1_M 28_R 0.58 0.00
98_A 96_A 0.58 0.00
42_S 38_T 0.58 0.00
95_K 21_A 0.58 0.00
88_I 44_N 0.58 0.00
25_Y 29_S 0.57 0.00
5_L 33_R 0.57 0.00
37_V 68_A 0.57 0.00
126_Y 79_F 0.57 0.00
120_I 87_G 0.57 0.00
84_G 73_G 0.57 0.00
89_Y 86_A 0.57 0.00
16_G 25_W 0.57 0.00
144_V 18_L 0.57 0.00
3_V 104_Q 0.56 0.00
87_K 22_K 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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