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OPENSEQ.org

L01 - S17
UniProt: Q5SLP7 - Q5SHP7
Length: 334
Sequences: 1525
Seq/Len: 4.95
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00Q 2j01C 2j02Q 2j03CContact Map
4juw4juwQ 4juxCContact Map
3knh3knhQ 3kniC 3knjQ 3knkCContact Map
2y102y10Q 2y11C 2y18Q 2y19CContact Map
3zn73zn7Q 3zn9C 3zndQ 3zneCContact Map
2y142y14Q 2y15C 2y16Q 2y17CContact Map
3huw3huwQ 3huxC 3huyQ 3huzCContact Map
2y0u2y0uQ 2y0vC 2y0wQ 2y0xCContact Map
2xqd2xqdQ 2xqeCContact Map
2x9r2x9rQ 2x9sC 2x9tQ 2x9uCContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
115_V 23_V 0.87 0.00
74_R 34_K 0.85 0.00
227_P 65_I 0.74 0.00
46_A 38_R 0.69 0.00
72_Q 76_L 0.68 0.00
210_L 7_T 0.68 0.00
63_V 40_K 0.65 0.00
52_P 37_K 0.62 0.00
19_K 41_K 0.60 0.00
2_P 80_G 0.59 0.00
143_A 40_K 0.59 0.00
46_A 67_K 0.58 0.00
155_R 73_V 0.58 0.00
15_V 48_E 0.57 0.00
3_K 40_K 0.57 0.00
43_E 1_M 0.57 0.00
194_I 52_K 0.56 0.00
110_D 76_L 0.56 0.00
88_E 16_Q 0.55 0.00
204_G 65_I 0.55 0.00
108_W 76_L 0.55 0.00
46_A 58_E 0.54 0.00
135_R 37_K 0.54 0.00
4_H 58_E 0.54 0.00
40_E 67_K 0.54 0.00
42_V 47_P 0.54 0.00
128_L 13_D 0.54 0.00
161_R 32_Y 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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