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OPENSEQ.org
L01 - L03
UniProt: Q5SLP7 - Q5SHN8
Length: 435
Sequences: 1632
Seq/Len: 3.79
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01CE 2j03CEContact Map
4juw4juxCEContact Map
4btc4btdCEContact Map
3knh3kniCE 3knkCEContact Map
2y102y11CE 2y19CEContact Map
3zn73zn9CE 3zneCEContact Map
2y142y15CE 2y17CEContact Map
3huw3huxCE 3huzCEContact Map
2y0u2y0vCE 2y0xCEContact Map
2xqd2xqeCEContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
129_G 18_D 0.82 0.00
124_V 164_R 0.78 0.00
167_D 182_L 0.76 0.00
123_A 121_N 0.73 0.00
183_P 171_E 0.71 0.00
126_S 37_R 0.70 0.00
28_R 107_T 0.70 0.00
184_E 73_E 0.69 0.00
135_R 164_R 0.68 0.00
13_E 90_T 0.68 0.00
116_A 25_V 0.66 0.00
38_F 167_V 0.65 0.00
224_R 41_K 0.64 0.00
7_R 1_M 0.63 0.00
67_H 180_N 0.63 0.00
126_S 72_V 0.63 0.00
215_V 185_K 0.63 0.00
101_I 60_N 0.63 0.00
10_A 85_N 0.62 0.00
164_F 124_G 0.62 0.00
196_A 159_H 0.62 0.00
130_R 114_A 0.62 0.00
166_N 75_V 0.61 0.00
104_I 192_N 0.61 0.00
194_I 78_L 0.60 0.00
161_R 145_K 0.60 0.00
204_G 68_A 0.60 0.00
220_G 105_T 0.60 0.00
178_K 152_K 0.60 0.00
204_G 63_L 0.59 0.00
18_N 169_N 0.59 0.00
20_V 116_V 0.59 0.00
31_K 74_P 0.59 0.00
16_D 172_V 0.58 0.00
50_I 106_G 0.58 0.00
120_V 50_G 0.58 0.00
218_T 153_G 0.58 0.00
54_R 83_D 0.58 0.00
149_N 144_R 0.58 0.00
5_G 36_R 0.57 0.00
113_A 117_M 0.56 0.00
213_V 150_V 0.56 0.00
52_P 136_R 0.56 0.00
52_P 187_A 0.56 0.00
28_R 63_L 0.56 0.00
205_A 145_K 0.56 0.00
47_K 159_H 0.56 0.00
22_T 40_E 0.55 0.00
176_V 32_P 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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