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OPENSEQ.org
L01 - L02
UniProt: Q5SLP7 - P60405
Length: 505
Sequences: 1522
Seq/Len: 3.03
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01CD 2j03CDContact Map
4juw4juxCDContact Map
4btc4btdCDContact Map
3knh3kniCD 3knkCDContact Map
2y102y11CD 2y19CDContact Map
3zn73zn9CD 3zneCDContact Map
2y142y15CD 2y17CDContact Map
3huw3huxCD 3huzCDContact Map
2y0u2y0vCD 2y0xCDContact Map
2xqd2xqeCDContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
78_I 10_T 0.94 0.00
53_R 37_L 0.90 0.00
179_A 258_K 0.86 0.00
4_H 261_K 0.84 0.00
172_I 177_L 0.84 0.00
102_Q 2_A 0.80 0.00
13_E 193_V 0.80 0.00
148_F 267_S 0.79 0.00
89_E 75_I 0.78 0.00
71_K 145_V 0.76 0.00
5_G 35_K 0.76 0.00
114_V 7_K 0.75 0.00
58_N 224_A 0.74 0.00
196_A 49_I 0.74 0.00
217_T 225_A 0.72 0.00
46_A 10_T 0.72 0.00
80_K 51_V 0.72 0.00
89_E 89_S 0.71 0.00
135_R 12_S 0.71 0.00
53_R 240_A 0.70 0.00
220_G 221_V 0.69 0.00
58_N 245_P 0.68 0.00
27_A 45_N 0.68 0.00
5_G 215_L 0.67 0.00
7_R 263_R 0.67 0.00
97_G 248_S 0.67 0.00
148_F 195_A 0.66 0.00
182_P 112_Q 0.66 0.00
44_V 89_S 0.66 0.00
19_K 70_W 0.66 0.00
61_G 156_A 0.66 0.00
141_P 233_H 0.66 0.00
28_R 267_S 0.65 0.00
135_R 55_G 0.65 0.00
43_E 261_K 0.65 0.00
165_R 272_A 0.65 0.00
22_T 112_Q 0.64 0.00
52_P 91_R 0.64 0.00
19_K 130_A 0.63 0.00
100_I 49_I 0.63 0.00
58_N 241_P 0.63 0.00
22_T 269_F 0.62 0.00
130_R 211_R 0.62 0.00
114_V 39_K 0.62 0.00
167_D 148_E 0.62 0.00
148_F 221_V 0.62 0.00
51_D 153_A 0.62 0.00
168_K 10_T 0.61 0.00
8_Y 261_K 0.61 0.00
225_I 271_I 0.61 0.00
105_L 36_P 0.61 0.00
82_E 248_S 0.61 0.00
228_H 263_R 0.61 0.00
197_L 168_R 0.61 0.00
54_R 248_S 0.61 0.00
227_P 18_V 0.61 0.00
12_L 225_A 0.60 0.00
193_F 10_T 0.60 0.00
30_V 65_I 0.60 0.00
52_P 41_G 0.60 0.00
10_A 28_E 0.60 0.00
194_I 200_D 0.60 0.00
219_M 101_E 0.60 0.00
78_I 107_A 0.60 0.00
12_L 54_R 0.59 0.00
221_P 197_G 0.59 0.00
152_E 121_P 0.59 0.00
122_G 167_G 0.58 0.00
58_N 242_R 0.58 0.00
143_A 186_H 0.58 0.00
205_A 51_V 0.58 0.00
185_K 272_A 0.58 0.00
23_I 255_K 0.58 0.00
50_I 124_P 0.57 0.00
85_K 12_S 0.57 0.00
149_N 267_S 0.57 0.00
210_L 40_T 0.57 0.00
12_L 17_T 0.57 0.00
3_K 149_P 0.57 0.00
27_A 111_L 0.57 0.00
68_G 189_C 0.57 0.00
213_V 39_K 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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