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OPENSEQ.org
L11 - L24
UniProt: Q5SLP6 - Q5SHP9
Length: 257
Sequences: 1261
Seq/Len: 5.23
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01KY 2j03KYContact Map
4juw4juxKYContact Map
4kix4kixIU 4kizIU 4kj1IU 4kj3IUContact Map
4kj54kj5IU 4kj7IU 4kj9IU 4kjbIUContact Map
2zjr2zjrFRContact Map
4gd13r8sIU 3r8tIUContact Map
3f1e3f1fKY 3f1hKYContact Map
3i8f3i8fU 3i8iLUContact Map
1nkw1nkwGSContact Map
3ofo3ofqIU 3ofrIUContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
12_L 71_K 0.81 0.00
20_A 73_R 0.72 0.00
84_L 29_E 0.70 0.00
23_V 36_A 0.67 0.00
69_T 67_L 0.64 0.00
78_I 28_K 0.64 0.00
122_A 8_K 0.61 0.00
96_V 28_K 0.60 0.00
97_G 49_V 0.59 0.00
8_V 15_V 0.59 0.00
136_V 80_G 0.56 0.00
58_T 99_C 0.55 0.00
6_A 103_G 0.54 0.00
30_H 26_K 0.54 0.00
94_E 94_K 0.53 0.00
20_A 63_K 0.52 0.00
90_K 87_K 0.52 0.00
18_T 94_K 0.50 0.00
132_R 61_I 0.48 0.00
86_K 74_P 0.48 0.00
98_R 65_A 0.48 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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