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OPENSEQ.org
L11 - S17
UniProt: Q5SLP6 - Q5SHP7
Length: 252
Sequences: 1315
Seq/Len: 5.95
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00Q 2j01K 2j02Q 2j03KContact Map
4juw4juwQ 4juxKContact Map
4kix4kixI 4kiyQ 4kizI 4kj0Q 4kj1I 4kj2Q 4kj3I 4kj4QContact Map
4kj54kj5I 4kj6Q 4kj7I 4kj8Q 4kj9I 4kjaQ 4kjbI 4kjcQContact Map
4gd13r8sI 3r8tI 4gd1Q 4gd2QContact Map
3f1e3f1eQ 3f1fK 3f1gQ 3f1hKContact Map
3i8f3i8gT 3i8hT 3i8iLContact Map
3ofo3ofoQ 3ofpQ 3ofqI 3ofrIContact Map
2x9r2x9rQ 2x9sK 2x9tQ 2x9uKContact Map
3i1m3i1mQ 3i1nI 3i1oQ 3i1pIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
41_F 35_V 0.78 0.00
20_A 35_V 0.78 0.00
71_T 41_K 0.70 0.00
41_F 37_K 0.68 0.00
13_P 30_P 0.63 0.00
49_G 22_L 0.60 0.00
29_Q 3_K 0.60 0.00
69_T 37_K 0.57 0.00
41_F 34_K 0.57 0.00
137_E 60_I 0.57 0.00
85_E 70_R 0.56 0.00
108_A 18_T 0.55 0.00
55_V 55_D 0.54 0.00
14_A 11_V 0.54 0.00
20_A 4_K 0.54 0.00
14_A 43_L 0.53 0.00
125_R 81_R 0.53 0.00
41_F 25_R 0.52 0.00
69_T 44_A 0.52 0.00
128_A 81_R 0.52 0.00
128_A 47_P 0.52 0.00
23_V 59_I 0.52 0.00
51_A 31_L 0.52 0.00
127_I 42_Y 0.51 0.00
78_I 50_K 0.51 0.00
107_I 59_I 0.51 0.00
123_A 39_S 0.51 0.00
66_T 27_F 0.51 0.00
83_G 72_R 0.51 0.00
32_A 53_L 0.51 0.00
85_E 81_R 0.50 0.00
64_S 48_E 0.50 0.00
20_A 18_T 0.50 0.00
47_N 15_M 0.50 0.00
87_G 38_R 0.49 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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