May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
L11 - L29
UniProt: Q5SLP6 - Q5SHP6
Length: 219
Sequences: 981
Seq/Len: 4.83
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoIVContact Map
1vq81vq8IVContact Map
1vqp1vqpIVContact Map
1vqm1vqmIVContact Map
1vql1vqlIVContact Map
1vqk1vqkIVContact Map
1yhq1yhqIVContact Map
1s721s72IVContact Map
1vq91vq9IVContact Map
1vqn1vqnIVContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
116_N 29_K 0.80 0.00
126_M 29_K 0.75 0.00
13_P 22_E 0.72 0.00
14_A 28_K 0.67 0.00
52_I 32_L 0.65 0.00
23_V 15_K 0.65 0.00
67_F 57_I 0.61 0.00
109_K 55_R 0.60 0.00
124_A 47_N 0.60 0.00
6_A 17_S 0.60 0.00
47_N 47_N 0.60 0.00
52_I 16_L 0.58 0.00
60_Y 27_E 0.58 0.00
46_A 39_A 0.57 0.00
38_V 51_R 0.56 0.00
120_L 42_G 0.56 0.00
121_E 20_E 0.56 0.00
63_R 63_V 0.55 0.00
109_K 29_K 0.54 0.00
40_A 31_E 0.54 0.00
23_V 53_L 0.53 0.00
87_G 24_L 0.53 0.00
112_M 45_S 0.51 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
Page generated in 0.401 seconds.