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OPENSEQ.org
L11 - S13
UniProt: Q5SLP6 - P80377
Length: 273
Sequences: 1284
Seq/Len: 4.88
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00M 2j01K 2j02M 2j03KContact Map
4juw4juwM 4juxKContact Map
4kix4kixI 4kiyM 4kizI 4kj0M 4kj1I 4kj2M 4kj3I 4kj4MContact Map
4kj54kj5I 4kj6M 4kj7I 4kj8M 4kj9I 4kjaM 4kjbI 4kjcMContact Map
4gd13r8sI 3r8tI 4gd1M 4gd2MContact Map
3f1e3f1eM 3f1fK 3f1gM 3f1hKContact Map
3i8f3i8gP 3i8hP 3i8iLContact Map
3ofo3ofoM 3ofpM 3ofqI 3ofrIContact Map
2x9r2x9rM 2x9sK 2x9tM 2x9uKContact Map
3i1m3i1mM 3i1nI 3i1oM 3i1pIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
82_A 7_V 0.92 0.01
52_I 8_E 0.83 0.01
63_R 115_K 0.75 0.01
63_R 11_R 0.73 0.00
6_A 114_R 0.73 0.00
39_K 34_L 0.71 0.00
20_A 82_M 0.71 0.00
23_V 63_T 0.69 0.00
77_L 48_L 0.68 0.00
76_Y 8_E 0.67 0.00
80_K 48_L 0.67 0.00
32_A 95_G 0.67 0.00
63_R 111_K 0.67 0.00
85_E 104_R 0.65 0.00
36_E 86_C 0.64 0.00
71_T 113_P 0.64 0.00
56_E 43_T 0.64 0.00
5_V 119_G 0.62 0.00
115_L 34_L 0.62 0.00
86_K 119_G 0.61 0.00
14_A 15_V 0.60 0.00
76_Y 77_N 0.59 0.00
18_T 9_I 0.59 0.00
97_G 104_R 0.59 0.00
7_V 117_V 0.59 0.00
133_S 87_Y 0.59 0.00
55_V 95_G 0.58 0.00
113_P 52_E 0.58 0.00
8_V 105_T 0.58 0.00
104_V 61_E 0.58 0.00
90_K 12_N 0.57 0.00
136_V 25_I 0.56 0.00
108_A 120_K 0.56 0.00
11_Q 73_E 0.56 0.00
5_V 9_I 0.55 0.00
89_H 62_N 0.55 0.00
75_S 119_G 0.55 0.00
41_F 50_E 0.55 0.00
125_R 40_N 0.55 0.00
50_D 63_T 0.54 0.00
97_G 61_E 0.54 0.00
99_I 119_G 0.53 0.00
98_R 32_E 0.53 0.00
51_A 77_N 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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