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OPENSEQ.org
L11 - S02
UniProt: Q5SLP6 - P80371
Length: 403
Sequences: 1302
Seq/Len: 3.54
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00B 2j01K 2j02B 2j03KContact Map
4juw4juwB 4juxKContact Map
4kix4kixI 4kiyB 4kizI 4kj0B 4kj1I 4kj2B 4kj3I 4kj4BContact Map
4kj54kj5I 4kj6B 4kj7I 4kj8B 4kj9I 4kjaB 4kjbI 4kjcBContact Map
4gd13r8sI 3r8tI 4gd1B 4gd2BContact Map
3f1e3f1eB 3f1fK 3f1gB 3f1hKContact Map
3i8f3i8gE 3i8hE 3i8iLContact Map
3ofo3ofoB 3ofpB 3ofqI 3ofrIContact Map
2x9r2x9rB 2x9sK 2x9tB 2x9uKContact Map
3i1m3i1mB 3i1nI 3i1oB 3i1pIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
20_A 51_L 0.96 0.01
56_E 119_E 0.90 0.01
109_K 108_I 0.88 0.01
117_T 21_R 0.86 0.01
98_R 58_I 0.85 0.01
43_A 142_L 0.82 0.01
138_V 60_D 0.82 0.01
75_S 118_L 0.78 0.00
16_K 171_A 0.75 0.00
44_A 113_H 0.75 0.00
9_K 33_Y 0.73 0.00
104_V 128_E 0.72 0.00
102_E 162_I 0.72 0.00
126_M 51_L 0.71 0.00
119_D 89_G 0.71 0.00
5_V 59_E 0.70 0.00
16_K 167_P 0.70 0.00
120_L 203_G 0.70 0.00
5_V 52_E 0.69 0.00
30_H 203_G 0.68 0.00
78_I 123_A 0.68 0.00
87_G 226_R 0.68 0.00
83_G 117_E 0.67 0.00
4_V 124_S 0.67 0.00
90_K 57_F 0.66 0.00
5_V 184_V 0.66 0.00
98_R 143_E 0.66 0.00
86_K 112_V 0.65 0.00
138_V 71_V 0.65 0.00
139_V 225_A 0.65 0.00
36_E 197_V 0.65 0.00
23_V 95_Q 0.65 0.00
41_F 140_H 0.64 0.00
23_V 208_I 0.64 0.00
86_K 137_R 0.64 0.00
132_R 164_V 0.63 0.00
139_V 127_I 0.63 0.00
78_I 91_P 0.62 0.00
38_V 95_Q 0.62 0.00
7_V 13_A 0.62 0.00
121_E 116_E 0.62 0.00
87_G 140_H 0.62 0.00
53_V 197_V 0.62 0.00
63_R 78_Q 0.62 0.00
52_I 214_I 0.61 0.00
63_R 118_L 0.61 0.00
20_A 43_D 0.61 0.00
98_R 85_A 0.61 0.00
102_E 222_I 0.61 0.00
90_K 120_A 0.60 0.00
23_V 121_L 0.60 0.00
126_M 35_E 0.59 0.00
119_D 219_V 0.59 0.00
66_T 144_R 0.59 0.00
13_P 223_I 0.59 0.00
112_M 108_I 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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