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OPENSEQ.org
L35 - S18
UniProt: Q5SKU1 - Q5SLQ0
Length: 153
Sequences: 964
Seq/Len: 7.30
I_Prob: 0.77
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cR 3v2d8 3v2eR 3v2f8Contact Map
2j002j00R 2j018 2j02R 2j038Contact Map
3uyd3uydU 3uye8 3uyfU 3uyg8Contact Map
3ohc3ohcR 3ohdR 3ohj8 3ohk8Contact Map
3knh3knhR 3kni8 3knjR 3knk8Contact Map
3f1e3f1eR 3f1f8 3f1gR 3f1h8Contact Map
3ohy3ohyR 3ohz8 3oi0R 3oi18Contact Map
3v223v22R 3v238 3v24R 3v258Contact Map
3uz63uz6U 3uz7U 3uz88 3uz98Contact Map
3oge3ogeR 3ogyR 3oh58 3oh78Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
63_P 66_L 1.42 0.77
46_R 70_I 1.13 0.52
61_L 44_L 0.95 0.33
64_Y 77_G 0.93 0.31
56_E 73_A 0.93 0.31
41_I 72_R 0.87 0.25
64_Y 66_L 0.84 0.23
4_M 82_T 0.82 0.21
6_T 69_T 0.80 0.19
41_I 24_A 0.79 0.19
22_V 42_R 0.78 0.18
45_G 81_F 0.78 0.18
54_E 32_R 0.76 0.17
52_K 81_F 0.76 0.17
18_A 48_G 0.76 0.16
17_T 64_R 0.74 0.15
10_A 46_E 0.74 0.15
62_L 36_N 0.72 0.14
62_L 77_G 0.71 0.14
4_M 37_V 0.70 0.13
30_R 20_A 0.70 0.12
15_K 61_K 0.68 0.11
22_V 45_S 0.67 0.11
62_L 79_L 0.67 0.11
47_K 68_K 0.66 0.11
41_I 20_A 0.66 0.10
8_K 59_S 0.66 0.10
44_K 53_R 0.65 0.10
46_R 79_L 0.65 0.10
10_A 49_K 0.64 0.09
43_Q 68_K 0.63 0.09
27_T 35_R 0.62 0.09
22_V 21_K 0.62 0.09
40_E 39_V 0.62 0.09
52_K 26_L 0.62 0.08
35_Q 30_D 0.62 0.08
32_L 52_P 0.61 0.08
27_T 32_R 0.61 0.08
27_T 69_T 0.60 0.08
23_V 58_L 0.60 0.08
22_V 20_A 0.60 0.08
25_M 41_K 0.60 0.08
10_A 66_L 0.60 0.08
29_K 38_E 0.60 0.08
15_K 45_S 0.59 0.07
37_S 73_A 0.59 0.07
38_G 83_E 0.59 0.07
27_T 36_N 0.58 0.07
9_G 84_K 0.58 0.07
11_K 60_A 0.58 0.07
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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