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OPENSEQ.org
L35 - S08
UniProt: Q5SKU1 - Q5SHQ2
Length: 203
Sequences: 1114
Seq/Len: 5.74
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cH 3v2d8 3v2eH 3v2f8Contact Map
2j002j00H 2j018 2j02H 2j038Contact Map
4juw4juwH 4jux8Contact Map
4kix4kix3 4kiyH 4kiz3 4kj0H 4kj13 4kj2H 4kj33 4kj4HContact Map
4kj54kj53 4kj6H 4kj73 4kj8H 4kj93 4kjaH 4kjb3 4kjcHContact Map
3uyd3uydK 3uye8 3uyfK 3uyg8Contact Map
4gd13r8s3 3r8t3 4gd1H 4gd2HContact Map
3ohc3ohcH 3ohdH 3ohj8 3ohk8Contact Map
3knh3knhH 3kni8 3knjH 3knk8Contact Map
3ohy3ohyH 3ohz8 3oi0H 3oi18Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
28_G 91_R 0.98 0.02
28_G 16_A 0.91 0.02
56_E 137_V 0.88 0.01
19_S 33_E 0.88 0.01
48_F 6_I 0.85 0.01
46_R 99_E 0.85 0.01
8_K 138_W 0.78 0.01
62_L 6_I 0.78 0.01
58_I 127_L 0.78 0.01
40_E 105_R 0.77 0.01
22_V 123_E 0.76 0.01
16_I 47_G 0.74 0.01
9_G 98_K 0.73 0.01
40_E 100_I 0.72 0.01
51_A 134_I 0.70 0.01
60_L 46_K 0.70 0.01
56_E 96_G 0.70 0.01
15_K 88_K 0.69 0.01
7_H 105_R 0.69 0.01
63_P 42_E 0.68 0.01
33_N 135_C 0.67 0.01
1_M 85_R 0.67 0.01
48_F 112_L 0.64 0.01
56_E 88_K 0.63 0.01
26_K 109_I 0.63 0.01
51_A 83_I 0.63 0.01
48_F 119_L 0.63 0.01
34_W 76_P 0.63 0.01
42_R 59_L 0.63 0.01
6_T 25_D 0.61 0.01
19_S 5_P 0.61 0.01
4_M 90_G 0.61 0.01
58_I 51_V 0.60 0.01
45_G 42_E 0.60 0.01
25_M 3_T 0.59 0.01
39_K 25_D 0.59 0.01
45_G 121_D 0.59 0.01
44_K 28_A 0.59 0.01
61_L 115_S 0.59 0.01
38_G 109_I 0.58 0.01
8_K 119_L 0.58 0.01
22_V 66_G 0.58 0.01
37_S 97_V 0.58 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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