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OPENSEQ.org
S16 - S20
UniProt: Q5SJH3 - P80380
Length: 194
Sequences: 1292
Seq/Len: 7.56
I_Prob: 0.06
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqePTContact Map
3v2c3v2cPT 3v2ePTContact Map
2uub2uubPTContact Map
2j002j00PT 2j02PTContact Map
3t1y3t1yPTContact Map
4juw4juwPTContact Map
2uua2uuaPTContact Map
4b3m4b3mPTContact Map
2uxc2uxcPTContact Map
4kix4kiyPT 4kj0PT 4kj2PT 4kj4PTContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
11_S 27_K 1.05 0.06
41_P 14_K 0.74 0.02
82_Q 15_R 0.72 0.02
67_T 90_Q 0.69 0.02
40_D 63_I 0.67 0.02
67_T 27_K 0.67 0.02
15_P 69_G 0.64 0.02
36_I 39_K 0.59 0.01
73_L 36_L 0.59 0.01
11_S 28_A 0.58 0.01
1_M 61_S 0.58 0.01
61_S 42_Q 0.57 0.01
21_V 87_K 0.57 0.01
8_R 90_Q 0.57 0.01
66_P 66_A 0.57 0.01
26_R 74_K 0.57 0.01
73_L 60_E 0.56 0.01
42_R 32_A 0.55 0.01
75_R 78_A 0.55 0.01
36_I 55_I 0.55 0.01
11_S 29_K 0.53 0.01
18_R 66_A 0.53 0.01
41_P 15_R 0.53 0.01
18_R 18_Q 0.52 0.01
40_D 56_M 0.52 0.01
5_R 80_R 0.52 0.01
56_A 89_R 0.52 0.01
1_M 41_I 0.51 0.01
69_T 64_D 0.51 0.01
11_S 16_H 0.51 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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