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OPENSEQ.org
L31 - S12
UniProt: Q5SJE1 - Q5SHN3
Length: 203
Sequences: 762
Seq/Len: 4.01
I_Prob: 0.15
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cL 3v2d4 3v2eL 3v2f4Contact Map
2j002j00L 2j014 2j02L 2j034Contact Map
4juw4juwL 4jux4Contact Map
3uyd3uydO 3uye4 3uyfO 3uyg4Contact Map
3ohc3ohcL 3ohdL 3ohj4 3ohk4Contact Map
3knh3knhL 3kni4 3knjL 3knk4Contact Map
3ohy3ohyL 3ohz4 3oi0L 3oi14Contact Map
3f1e3f1eL 3f1f4 3f1gL 3f1h4Contact Map
3v223v22L 3v234 3v24L 3v254Contact Map
3uz63uz6O 3uz7O 3uz84 3uz94Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
43_Y 105_A 1.17 0.15
9_L 8_V 1.10 0.12
65_D 79_V 1.00 0.09
51_D 30_R 0.95 0.07
48_R 21_V 0.95 0.07
19_G 64_T 0.95 0.07
35_V 15_V 0.95 0.07
50_V 15_V 0.93 0.07
34_E 104_A 0.91 0.07
65_D 121_K 0.90 0.06
63_Y 36_V 0.85 0.05
62_R 122_P 0.85 0.05
20_N 82_I 0.85 0.05
56_V 112_K 0.81 0.05
56_V 105_A 0.81 0.04
62_R 4_I 0.81 0.04
35_V 20_K 0.81 0.04
55_R 30_R 0.80 0.04
19_G 5_N 0.78 0.04
49_F 40_V 0.77 0.04
15_I 98_V 0.76 0.04
22_I 109_D 0.75 0.04
58_R 20_K 0.74 0.03
3_E 121_K 0.73 0.03
35_V 109_D 0.73 0.03
50_V 82_I 0.73 0.03
56_V 40_V 0.72 0.03
5_I 54_K 0.72 0.03
60_Q 35_T 0.72 0.03
3_E 17_K 0.72 0.03
34_E 36_V 0.71 0.03
32_Y 22_P 0.71 0.03
63_Y 70_E 0.71 0.03
35_V 88_K 0.70 0.03
46_Q 54_K 0.70 0.03
50_V 60_G 0.70 0.03
43_Y 70_E 0.69 0.03
48_R 97_I 0.68 0.03
39_C 5_N 0.68 0.03
25_Y 79_V 0.66 0.02
8_K 13_E 0.66 0.02
28_K 101_V 0.66 0.02
38_K 61_Y 0.66 0.02
53_E 35_T 0.66 0.02
57_E 121_K 0.65 0.02
21_V 119_T 0.65 0.02
46_Q 11_G 0.65 0.02
28_K 102_Y 0.64 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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