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OPENSEQ.org
L31 - S03
UniProt: Q5SJE1 - P80372
Length: 310
Sequences: 943
Seq/Len: 3.40
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cC 3v2d4 3v2eC 3v2f4Contact Map
2j002j00C 2j014 2j02C 2j034Contact Map
4juw4juwC 4jux4Contact Map
3uyd3uydF 3uye4 3uyfF 3uyg4Contact Map
3knh3knhC 3kni4 3knjC 3knk4Contact Map
3ohc3ohcC 3ohdC 3ohj4 3ohk4Contact Map
3ohy3ohyC 3ohz4 3oi0C 3oi14Contact Map
3f1e3f1eC 3f1f4 3f1gC 3f1h4Contact Map
3v223v22C 3v234 3v24C 3v254Contact Map
3uz63uz6F 3uz7F 3uz84 3uz94Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
15_I 76_V 1.08 0.03
38_K 119_R 1.05 0.03
62_R 118_Q 0.97 0.02
60_Q 185_G 0.94 0.02
48_R 3_N 0.94 0.02
50_V 161_E 0.90 0.02
57_E 35_E 0.88 0.02
48_R 103_V 0.85 0.02
25_Y 209_G 0.83 0.01
28_K 75_V 0.82 0.01
5_I 13_G 0.82 0.01
60_Q 6_H 0.81 0.01
65_D 68_V 0.80 0.01
62_R 146_A 0.79 0.01
49_F 79_R 0.79 0.01
8_K 41_G 0.77 0.01
34_E 18_W 0.76 0.01
63_Y 143_E 0.75 0.01
38_K 5_I 0.75 0.01
48_R 138_V 0.74 0.01
63_Y 202_I 0.74 0.01
62_R 80_G 0.73 0.01
34_E 128_F 0.72 0.01
57_E 72_K 0.72 0.01
48_R 158_G 0.71 0.01
21_V 149_A 0.70 0.01
28_K 43_L 0.69 0.01
25_Y 140_R 0.69 0.01
48_R 173_V 0.69 0.01
10_V 182_I 0.67 0.01
58_R 176_H 0.67 0.01
21_V 5_I 0.66 0.01
21_V 90_E 0.65 0.01
34_E 110_N 0.65 0.01
4_G 154_S 0.65 0.01
19_G 134_I 0.65 0.01
57_E 69_H 0.64 0.01
58_R 13_G 0.64 0.01
27_T 109_P 0.64 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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