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OPENSEQ.org
L25 - S15
UniProt: Q5SHZ1 - Q5SJ76
Length: 295
Sequences: 1223
Seq/Len: 4.46
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cO 3v2dZ 3v2eO 3v2fZContact Map
2j002j00O 2j01Z 2j02O 2j03ZContact Map
4juw4juwO 4juxZContact Map
4kix4kixV 4kiyO 4kizV 4kj0O 4kj1V 4kj2O 4kj3V 4kj4OContact Map
4kj54kj5V 4kj6O 4kj7V 4kj8O 4kj9V 4kjaO 4kjbV 4kjcOContact Map
3uyd3uydR 3uyeV 3uyfR 3uygVContact Map
4gd13r8sV 3r8tV 4gd1O 4gd2OContact Map
3knh3knhO 3kniZ 3knjO 3knkZContact Map
3ohc3ohcO 3ohdO 3ohjZ 3ohkZContact Map
3f1e3f1eO 3f1fZ 3f1gO 3f1hZContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
76_L 89_G 0.98 0.01
101_P 87_I 0.97 0.01
15_P 40_S 0.86 0.01
27_V 79_R 0.86 0.01
126_V 31_L 0.79 0.01
54_H 18_F 0.78 0.01
87_D 60_V 0.76 0.01
77_D 53_H 0.74 0.01
91_L 47_K 0.72 0.01
56_V 87_I 0.72 0.01
152_A 15_F 0.71 0.01
110_G 15_F 0.69 0.01
43_E 54_R 0.69 0.01
78_K 53_H 0.68 0.01
42_V 71_Q 0.68 0.01
128_V 31_L 0.67 0.01
124_I 80_A 0.67 0.01
60_E 16_A 0.66 0.01
137_I 38_R 0.66 0.01
90_V 33_T 0.65 0.01
34_N 54_R 0.65 0.01
53_I 33_T 0.64 0.01
40_D 80_A 0.64 0.01
70_L 62_Q 0.64 0.01
98_M 65_R 0.63 0.01
114_G 74_D 0.63 0.01
123_D 59_M 0.63 0.01
142_S 14_E 0.63 0.01
41_L 74_D 0.63 0.01
174_V 52_S 0.62 0.01
117_L 68_R 0.62 0.01
161_V 62_Q 0.62 0.01
58_V 4_T 0.61 0.01
5_L 6_E 0.61 0.01
174_V 19_P 0.61 0.01
100_V 11_V 0.61 0.01
66_S 64_R 0.61 0.01
154_D 19_P 0.60 0.01
91_L 17_R 0.60 0.01
27_V 77_R 0.60 0.01
83_P 50_H 0.59 0.01
49_R 2_P 0.59 0.01
119_E 11_V 0.59 0.01
61_L 5_K 0.58 0.01
109_A 48_K 0.58 0.00
154_D 10_K 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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