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OPENSEQ.org
L25 - L36
UniProt: Q5SHZ1 - Q5SHR2
Length: 243
Sequences: 819
Seq/Len: 3.61
I_Prob: 0.05
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dZ9 3v2fZ9Contact Map
2j002j01Z9 2j03Z9Contact Map
4juw4juxZ9Contact Map
4kix4kixV4 4kizV4 4kj1V4 4kj3V4Contact Map
4kj54kj5V4 4kj7V4 4kj9V4 4kjbV4Contact Map
2zjr2zjrS4Contact Map
4btc4btdZ9Contact Map
3v223v23Z9 3v25Z9Contact Map
4gd13r8sV4 3r8tV4Contact Map
3knh3kniZ9 3knkZ9Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
45_D 31_K 1.10 0.05
81_R 20_H 1.05 0.04
2_E 9_R 1.01 0.04
110_G 17_I 0.90 0.03
163_L 22_R 0.84 0.02
12_G 35_R 0.80 0.02
109_A 31_K 0.79 0.02
113_A 18_R 0.77 0.02
114_G 4_R 0.76 0.02
110_G 2_K 0.75 0.02
88_F 30_P 0.75 0.02
132_N 22_R 0.75 0.02
61_L 9_R 0.74 0.02
117_L 4_R 0.74 0.02
38_Y 29_N 0.74 0.02
17_A 31_K 0.74 0.02
63_D 15_K 0.73 0.01
114_G 10_I 0.72 0.01
74_V 29_N 0.71 0.01
70_L 10_I 0.70 0.01
113_A 10_I 0.70 0.01
74_V 22_R 0.69 0.01
83_P 13_K 0.68 0.01
15_P 29_N 0.68 0.01
8_Y 18_R 0.68 0.01
14_K 35_R 0.67 0.01
119_E 16_V 0.67 0.01
115_G 18_R 0.67 0.01
67_L 31_K 0.67 0.01
14_K 31_K 0.67 0.01
166_S 16_V 0.67 0.01
103_R 25_V 0.66 0.01
78_K 33_K 0.66 0.01
4_R 29_N 0.66 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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