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OPENSEQ.org
L25 - S05
UniProt: Q5SHZ1 - Q5SHQ5
Length: 368
Sequences: 1171
Seq/Len: 3.43
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cE 3v2dZ 3v2eE 3v2fZContact Map
2j002j00E 2j01Z 2j02E 2j03ZContact Map
4juw4juwE 4juxZContact Map
4kix4kixV 4kiyE 4kizV 4kj0E 4kj1V 4kj2E 4kj3V 4kj4EContact Map
4kj54kj5V 4kj6E 4kj7V 4kj8E 4kj9V 4kjaE 4kjbV 4kjcEContact Map
3uyd3uydH 3uyeV 3uyfH 3uygVContact Map
4gd13r8sV 3r8tV 4gd1E 4gd2EContact Map
3knh3knhE 3kniZ 3knjE 3knkZContact Map
3ohc3ohcE 3ohdE 3ohjZ 3ohkZContact Map
3f1e3f1eE 3f1fZ 3f1gE 3f1hZContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
128_V 9_K 1.00 0.01
102_L 11_I 0.93 0.01
127_K 24_R 0.93 0.01
54_H 112_L 0.91 0.01
58_V 38_Q 0.87 0.01
103_R 150_R 0.86 0.01
94_E 115_V 0.86 0.01
61_L 66_M 0.83 0.01
27_V 89_I 0.82 0.01
36_K 138_A 0.82 0.01
88_F 13_I 0.81 0.01
16_S 86_A 0.80 0.01
66_S 12_L 0.78 0.01
108_P 119_L 0.78 0.01
72_R 55_V 0.76 0.01
168_E 48_A 0.76 0.01
55_H 56_Q 0.75 0.01
5_L 118_I 0.74 0.01
88_F 5_D 0.73 0.01
166_S 117_D 0.73 0.01
13_E 20_Q 0.72 0.01
7_A 9_K 0.72 0.01
118_Q 8_E 0.72 0.01
139_V 41_V 0.72 0.01
96_V 32_V 0.72 0.01
113_A 100_V 0.71 0.01
149_S 33_V 0.70 0.01
162_E 74_G 0.70 0.01
171_I 91_L 0.70 0.01
63_D 68_E 0.70 0.01
48_F 13_I 0.70 0.01
46_K 11_I 0.69 0.00
137_I 116_T 0.69 0.00
35_R 41_V 0.69 0.00
122_R 37_R 0.69 0.00
142_S 116_T 0.69 0.00
35_R 5_D 0.69 0.00
146_I 8_E 0.68 0.00
45_D 26_F 0.68 0.00
7_A 24_R 0.68 0.00
32_H 8_E 0.68 0.00
91_L 24_R 0.67 0.00
138_E 142_L 0.67 0.00
119_E 147_D 0.67 0.00
171_I 56_Q 0.67 0.00
133_I 61_Y 0.66 0.00
62_P 24_R 0.66 0.00
75_N 63_R 0.66 0.00
129_S 138_A 0.66 0.00
68_P 27_R 0.66 0.00
135_E 29_G 0.66 0.00
88_F 108_A 0.66 0.00
73_Q 136_M 0.65 0.00
78_K 16_T 0.65 0.00
54_H 10_M 0.65 0.00
174_V 125_S 0.65 0.00
48_F 122_E 0.65 0.00
169_E 38_Q 0.65 0.00
142_S 66_M 0.65 0.00
89_F 20_Q 0.65 0.00
150_L 68_E 0.65 0.00
18_L 118_I 0.65 0.00
7_A 64_R 0.64 0.00
162_E 19_M 0.64 0.00
99_Y 78_H 0.64 0.00
102_L 150_R 0.63 0.00
106_G 93_P 0.63 0.00
47_V 117_D 0.63 0.00
57_I 56_Q 0.63 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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