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OPENSEQ.org
L25 - S07
UniProt: Q5SHZ1 - P17291
Length: 362
Sequences: 1162
Seq/Len: 3.43
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cG 3v2dZ 3v2eG 3v2fZContact Map
2j002j00G 2j01Z 2j02G 2j03ZContact Map
4juw4juwG 4juxZContact Map
4kix4kixV 4kiyG 4kizV 4kj0G 4kj1V 4kj2G 4kj3V 4kj4GContact Map
4kj54kj5V 4kj6G 4kj7V 4kj8G 4kj9V 4kjaG 4kjbV 4kjcGContact Map
3uyd3uydJ 3uyeV 3uyfJ 3uygVContact Map
4gd13r8sV 3r8tV 4gd1G 4gd2GContact Map
3ohc3ohcG 3ohdG 3ohjZ 3ohkZContact Map
3knh3knhG 3kniZ 3knjG 3knkZContact Map
3ohy3ohyG 3ohzZ 3oi0G 3oi1ZContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
59_L 100_A 1.02 0.01
115_G 100_A 1.01 0.01
78_K 83_A 0.99 0.01
28_M 60_K 0.96 0.01
72_R 83_A 0.94 0.01
15_P 149_R 0.93 0.01
148_D 52_E 0.89 0.01
67_L 138_K 0.86 0.01
107_T 89_M 0.84 0.01
119_E 134_A 0.83 0.01
72_R 138_K 0.83 0.01
172_A 30_I 0.82 0.01
72_R 30_I 0.81 0.01
137_I 107_A 0.81 0.01
72_R 84_N 0.80 0.01
142_S 107_A 0.80 0.01
147_G 46_A 0.79 0.01
61_L 27_I 0.79 0.01
86_V 8_E 0.78 0.01
157_L 38_L 0.77 0.01
150_L 51_Q 0.77 0.01
32_H 29_K 0.77 0.01
24_L 9_V 0.76 0.01
87_D 77_S 0.75 0.01
122_R 73_M 0.74 0.01
103_R 45_D 0.74 0.01
100_V 45_D 0.74 0.01
91_L 76_R 0.72 0.01
11_E 18_Y 0.72 0.01
20_R 84_N 0.72 0.01
99_Y 4_R 0.71 0.01
43_E 58_P 0.71 0.01
55_H 23_V 0.71 0.01
72_R 43_F 0.71 0.01
49_R 20_D 0.70 0.01
169_E 98_S 0.70 0.01
131_R 108_A 0.70 0.01
171_I 109_N 0.69 0.01
177_P 24_T 0.69 0.01
39_V 67_E 0.69 0.01
103_R 73_M 0.69 0.01
125_L 61_V 0.69 0.01
105_V 106_Q 0.69 0.01
148_D 33_D 0.69 0.01
135_E 46_A 0.69 0.01
16_S 17_V 0.68 0.01
103_R 134_A 0.68 0.01
144_L 154_Y 0.68 0.01
106_G 110_Q 0.68 0.01
154_D 38_L 0.68 0.01
154_D 94_R 0.68 0.01
53_I 36_K 0.68 0.01
38_Y 139_E 0.67 0.01
18_L 7_A 0.67 0.01
83_P 65_A 0.67 0.01
133_I 126_D 0.67 0.01
163_L 119_R 0.66 0.01
172_A 104_L 0.66 0.01
3_Y 36_K 0.66 0.01
47_V 18_Y 0.65 0.01
88_F 53_K 0.65 0.01
169_E 27_I 0.65 0.01
181_E 99_L 0.65 0.01
28_M 100_A 0.65 0.01
77_D 8_E 0.65 0.01
28_M 152_A 0.65 0.01
59_L 92_S 0.65 0.01
161_V 20_D 0.65 0.01
152_A 129_E 0.65 0.01
114_G 137_K 0.64 0.01
162_E 53_K 0.64 0.01
70_L 51_Q 0.64 0.01
13_E 40_A 0.64 0.01
66_S 69_V 0.64 0.01
97_E 104_L 0.64 0.01
43_E 20_D 0.63 0.01
93_D 133_G 0.63 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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